Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   FGL00_RS05665 Genome accession   NZ_LR594034
Coordinates   1122175..1122363 (-) Length   62 a.a.
NCBI ID   WP_012767008.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1117175..1127363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL00_RS05640 (NCTC8546_01166) - 1118967..1119338 (+) 372 WP_003053565.1 GntR family transcriptional regulator -
  FGL00_RS05645 (NCTC8546_01167) - 1119338..1120036 (+) 699 WP_003053563.1 ABC transporter ATP-binding protein -
  FGL00_RS05650 (NCTC8546_01168) - 1120046..1120834 (+) 789 WP_003053541.1 hypothetical protein -
  FGL00_RS05655 (NCTC8546_01169) - 1120970..1121584 (-) 615 WP_003053567.1 TVP38/TMEM64 family protein -
  FGL00_RS05665 (NCTC8546_01171) prx 1122175..1122363 (-) 189 WP_012767008.1 hypothetical protein Regulator
  FGL00_RS05670 (NCTC8546_01172) - 1122596..1123585 (+) 990 WP_050443212.1 DNA/RNA non-specific endonuclease -
  FGL00_RS05675 (NCTC8546_01173) - 1123647..1123847 (-) 201 WP_011888781.1 CsbD family protein -
  FGL00_RS05680 (NCTC8546_01174) - 1124031..1125002 (-) 972 WP_011888780.1 Abi family protein -
  FGL00_RS05685 (NCTC8546_01175) - 1125312..1126529 (-) 1218 WP_138098457.1 peptidoglycan amidohydrolase family protein -
  FGL00_RS05690 (NCTC8546_01177) - 1126643..1126828 (-) 186 WP_138098459.1 holin -
  FGL00_RS05695 (NCTC8546_01178) - 1126825..1127121 (-) 297 WP_136261349.1 hypothetical protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7439.33 Da        Isoelectric Point: 4.1958

>NTDB_id=1004944 FGL00_RS05665 WP_012767008.1 1122175..1122363(-) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
MLTYDEFKQAIDDRYITGHTVAIVRKNGQIFDYVLSNEKIRDWEVVTEERVEDVLDELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1004944 FGL00_RS05665 WP_012767008.1 1122175..1122363(-) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
ATGCTAACATACGATGAGTTTAAGCAAGCTATTGATGACAGATATATCACAGGACATACAGTGGCGATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGTCGAATGAGAAGATAAGAGATTGGGAGGTTGTGACAGAGGAGAGAGTAGAAGATG
TTTTGGATGAATTAGACTATATTAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

77.419

100

0.774
  prx Streptococcus pyogenes MGAS315

79.661

95.161

0.758
  prx Streptococcus pyogenes MGAS315

75.862

93.548

0.71
  prx Streptococcus pyogenes MGAS8232

74.138

93.548

0.694
  prx Streptococcus pyogenes MGAS315

71.186

95.161

0.677
  prx Streptococcus pyogenes MGAS315

82.927

66.129

0.548
  prx Streptococcus pyogenes MGAS315

73.81

67.742

0.5