Detailed information NTG1002958

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABEF88_RS01870
• Genome accession: NZ_CP156804
• Coordinates: 387912..388970 (+)
• Length: 352 a.a.
• NCBI ID: WP_034585542.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7881
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 382912..393970

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF88_RS01855 (ABEF88_01855)	-	382946..383749 (+)	804	WP_347453497.1	putative RNA methyltransferase	-
ABEF88_RS01860 (ABEF88_01860)	-	383804..385108 (-)	1305	WP_347453003.1	IS4 family transposase	-
ABEF88_RS01865 (ABEF88_01865)	ponA	385214..387745 (-)	2532	WP_347453498.1	penicillin-binding protein PBP1a	-
ABEF88_RS01870 (ABEF88_01870)	pilM	387912..388970 (+)	1059	WP_034585542.1	pilus assembly protein PilM	Machinery gene
ABEF88_RS01875 (ABEF88_01875)	pilN	388970..389614 (+)	645	WP_347453499.1	PilN domain-containing protein	Machinery gene
ABEF88_RS01880 (ABEF88_01880)	comO	389611..390330 (+)	720	WP_404798961.1	type 4a pilus biogenesis protein PilO	Machinery gene
ABEF88_RS01885 (ABEF88_01885)	pilP	390330..390857 (+)	528	WP_034585535.1	pilus assembly protein PilP	Machinery gene
ABEF88_RS01890 (ABEF88_01890)	pilQ	390919..393042 (+)	2124	WP_347453500.1	type IV pilus secretin PilQ family protein	Machinery gene
ABEF88_RS01895 (ABEF88_01895)	aroK	393079..393615 (+)	537	WP_347453501.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39042.55 Da
• Isoelectric Point: 4.5358

>NTDB_id=1002958 ABEF88_RS01870 WP_034585542.1 387912..388970(+) (pilM) [Acinetobacter thermotolerans strain ANC 7881]
MRRLYRKPNKGLIGVDISSTSVKVLELSMKSGRYWVESYALIPLPEGSVVEKNILNPEAVGDALARAMNLANTQSNQAAF
AIPTSMSITKTIEMDADMTDDEREIQIREDAEQYIPFPLDEASIDFEVLPDRLSNPNRVNVLLVATRIENVEARSEVLEI
AGVTPKIADVESFAIENAFRVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKIIYTREQVFGGKQLTQEIQNRYGLSYEE
AGRAKKTRALPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1002958 ABEF88_RS01870 WP_034585542.1 387912..388970(+) (pilM) [Acinetobacter thermotolerans strain ANC 7881]
GTGCGCAGGTTATATCGTAAGCCAAACAAGGGGTTAATAGGTGTTGATATCAGTTCGACGTCTGTTAAAGTTTTGGAACT
TTCCATGAAAAGCGGACGGTATTGGGTCGAGAGTTATGCTCTAATTCCATTACCGGAAGGCAGTGTTGTTGAAAAAAACA
TCTTAAATCCGGAAGCAGTCGGCGATGCCCTGGCTCGTGCCATGAACTTGGCCAATACCCAGTCCAATCAGGCAGCCTTT
GCGATTCCTACCTCCATGTCGATCACCAAAACGATCGAAATGGATGCAGATATGACGGATGATGAACGTGAAATTCAGAT
CCGTGAAGATGCTGAACAATACATTCCATTCCCGCTGGATGAAGCAAGTATTGATTTTGAAGTCTTGCCAGATCGTCTCT
CTAATCCAAACCGTGTCAATGTGCTGCTGGTGGCAACCCGTATCGAAAATGTGGAAGCACGTTCAGAAGTACTGGAAATT
GCTGGCGTGACACCAAAGATTGCCGATGTGGAAAGCTTCGCGATTGAAAATGCCTTCCGGGTATTTTCAGATACATTGCC
GATGGGTGTGAATACGGTAGGTATTCTGGACATTGGTCACAGCATGACTACATTGTCGGTCATGCAAAACAACAAGATTA
TTTATACGCGTGAGCAGGTGTTTGGCGGTAAACAGCTTACGCAGGAAATTCAGAACCGTTATGGTCTGTCCTATGAAGAA
GCTGGACGTGCCAAGAAAACCCGTGCATTGCCGGATGACTATGATATCGAGGTGCTAGAGCCGTTCCTAGATGCTGTAGT
GCAACAGGCAGCACGTTCATTGCAGTTCTTCTTTTCATCATCTCAGTTTAACGAGATTGATCATATTCTATTGGCAGGGG
GGAATGCCAATATTCCAGGCCTGGCAAAACTTTTACAACAGAAACTGGGCTACCGTGTTACGATCGCAAATCCATTTTTA
CAGATGGGCTTTTCTCCTCAAATTGATATTAAAAAAATTGAAAATGATGCGTCATCACTCATGGTTGCATGCGGTCTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	84.375	100	0.844
comM	Acinetobacter nosocomialis M2	84.375	100	0.844
comM	Acinetobacter baylyi ADP1	78.125	100	0.781
pilM	Legionella pneumophila strain ERS1305867	39.266	100	0.395