Detailed information NTG0100257

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AACH63_RS01935
• Genome accession: NZ_AP027240
• Coordinates: 382688..383287 (-)
• Length: 199 a.a.
• NCBI ID: WP_003134020.1
• Uniprot ID: -
• Organism: Lactococcus formosensis strain L21-20
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 377688..388287

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACH63_RS01925 (LG21E20_03720)	-	377745..378968 (+)	1224	WP_096368654.1	FtsW/RodA/SpoVE family cell cycle protein	-
AACH63_RS01930 (LG21E20_03730)	-	379169..382588 (+)	3420	WP_096368653.1	pyruvate carboxylase	-
AACH63_RS01935 (LG21E20_03740)	clpP	382688..383287 (-)	600	WP_003134020.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AACH63_RS01940 (LG21E20_03750)	-	383466..383843 (+)	378	WP_096368652.1	VOC family protein	-
AACH63_RS01945 (LG21E20_03760)	-	383903..384433 (+)	531	WP_017368814.1	hypothetical protein	-
AACH63_RS01950 (LG21E20_03770)	spx	384594..384992 (+)	399	WP_003134024.1	transcriptional regulator Spx	-
AACH63_RS01955 (LG21E20_03780)	-	385128..385901 (+)	774	WP_096368651.1	TatD family hydrolase	-
AACH63_RS01960 (LG21E20_03790)	rnmV	385898..386443 (+)	546	WP_096368650.1	ribonuclease M5	-
AACH63_RS01965 (LG21E20_03800)	-	386440..387363 (+)	924	WP_096368649.1	ABC transporter ATP-binding protein	-
AACH63_RS01970 (LG21E20_03810)	-	387356..388126 (+)	771	WP_096368648.1	ABC transporter permease	-

Sequence

Protein

• Length: 199 a.a.
• Molecular weight: 21787.90 Da
• Isoelectric Point: 4.7242

>NTDB_id=100257 AACH63_RS01935 WP_003134020.1 382688..383287(-) (clpP) [Lactococcus formosensis strain L21-20]
MGYLVPTVIEQSSRGERAYDIYSRLLKDRIIMLTGQVEDGMANSIIAQLLFLDAQDSTKDIYLYINTPGGSVSAGLAIVD
TMNFIKSDVQTIVMGIAASMGTIIASSGTKGKRFMLPHAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRRTLEKILAEN
SGQSMEKVHADAERDNWMTAQETLDYGFIDEIMEANSLK

Nucleotide

• Length: 600 bp

>NTDB_id=100257 AACH63_RS01935 WP_003134020.1 382688..383287(-) (clpP) [Lactococcus formosensis strain L21-20]
ATGGGATATTTAGTACCTACTGTCATCGAGCAATCAAGCCGTGGTGAACGCGCATATGACATTTACAGCCGTCTACTGAA
GGACCGTATCATCATGTTGACAGGCCAAGTTGAGGATGGTATGGCCAACTCAATCATCGCACAACTCCTCTTCTTGGATG
CCCAAGACAGCACAAAGGACATTTACCTCTATATTAATACACCTGGTGGTTCTGTGTCTGCTGGACTTGCGATTGTAGAT
ACCATGAACTTCATCAAGTCTGATGTTCAAACAATCGTTATGGGTATCGCTGCATCTATGGGTACAATCATTGCTTCTAG
TGGTACAAAAGGTAAACGTTTCATGTTGCCACATGCAGAATACATGATTCACCAACCTATGGGAGGTACTGGTGGCGGCA
CACAACAAACAGATATGGCTATTGCTGCGGAACATTTGCTTAAAACACGTCGTACTTTAGAAAAGATTTTGGCAGAAAAC
TCTGGTCAATCTATGGAAAAAGTACATGCCGATGCAGAACGTGATAACTGGATGACTGCACAAGAAACATTAGACTATGG
TTTCATTGATGAAATCATGGAAGCCAACAGCTTGAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	89.796	98.492	0.884
clpP	Streptococcus pneumoniae D39	89.796	98.492	0.884
clpP	Streptococcus pneumoniae R6	89.796	98.492	0.884
clpP	Streptococcus pneumoniae TIGR4	89.796	98.492	0.884
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.94	100	0.879
clpP	Lactococcus lactis subsp. cremoris KW2	87.437	100	0.874
clpP	Streptococcus thermophilus LMG 18311	87.755	98.492	0.864
clpP	Streptococcus thermophilus LMD-9	87.755	98.492	0.864
clpP	Streptococcus pyogenes JRS4	84.184	98.492	0.829
clpP	Streptococcus pyogenes MGAS315	84.184	98.492	0.829
clpP	Streptococcus mutans UA159	84.184	98.492	0.829
clpP	Bacillus subtilis subsp. subtilis str. 168	58.421	95.477	0.558
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	96.985	0.553