Detailed information NTG1001859

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: ABC807_RS08475
• Genome accession: NZ_CP156625
• Coordinates: 1623858..1625501 (+)
• Length: 547 a.a.
• NCBI ID: WP_078133841.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TL7/1993
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1618858..1630501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC807_RS08425 (ABC807_08425)	blpN	1619221..1619424 (-)	204	WP_001099492.1	two-peptide bacteriocin subunit BlpN	-
ABC807_RS08430 (ABC807_08430)	blpM	1619440..1619694 (-)	255	WP_000379879.1	two-peptide bacteriocin subunit BlpM	-
ABC807_RS08435 (ABC807_08435)	-	1619844..1620648 (-)	805	Protein_1620	IS5 family transposase	-
ABC807_RS08440 (ABC807_08440)	-	1620846..1621250 (-)	405	WP_000846944.1	hypothetical protein	-
ABC807_RS08445 (ABC807_08445)	-	1621247..1621411 (-)	165	WP_000727118.1	hypothetical protein	-
ABC807_RS08450 (ABC807_08450)	-	1621708..1621827 (-)	120	WP_000346298.1	PncF family bacteriocin immunity protein	-
ABC807_RS08455 (ABC807_08455)	blpU	1621830..1622060 (-)	231	WP_000379964.1	bacteriocin-like peptide BlpU	-
ABC807_RS08460 (ABC807_08460)	blpJ	1622129..1622398 (-)	270	WP_001093248.1	bacteriocin-like peptide BlpJ	-
ABC807_RS08465 (ABC807_08465)	blpI	1622865..1623062 (-)	198	WP_001093259.1	bacteriocin-like peptide BlpI	-
ABC807_RS08470 (ABC807_08470)	comA/nlmT	1623344..1623931 (+)	588	WP_001810228.1	cysteine peptidase family C39 domain-containing protein	Regulator
ABC807_RS08475 (ABC807_08475)	comA/nlmT	1623858..1625501 (+)	1644	WP_078133841.1	peptide cleavage/export ABC transporter	Regulator
ABC807_RS08480 (ABC807_08480)	-	1625512..1626873 (+)	1362	WP_001069091.1	bacteriocin secretion accessory protein	-
ABC807_RS08485 (ABC807_08485)	blpC	1626930..1627085 (+)	156	WP_000358817.1	quorum-sensing system pheromone BlpC	-
ABC807_RS08490 (ABC807_08490)	-	1627127..1628467 (-)	1341	WP_001017638.1	sensor histidine kinase	-
ABC807_RS08495 (ABC807_08495)	comE/blpR	1628481..1629218 (-)	738	WP_001219120.1	LytTR family DNA-binding domain-containing protein	Regulator
ABC807_RS08500 (ABC807_08500)	-	1629223..1629561 (-)	339	WP_000682135.1	LytTR family DNA-binding domain-containing protein	-
ABC807_RS08505 (ABC807_08505)	-	1629838..1630167 (+)	330	WP_000132572.1	hypothetical protein	-

Sequence

Protein

• Length: 547 a.a.
• Molecular weight: 61617.57 Da
• Isoelectric Point: 6.5088

>NTDB_id=1001859 ABC807_RS08475 WP_078133841.1 1623858..1625501(+) (comA/nlmT) [Streptococcus pneumoniae strain TL7/1993]
MVLSSLLVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITYILQQVMSFSRDYLLTVLSQRLSIDVILSYIRHIF
ELPMSFFATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVGGVLLAQNPNLFLLSLLSIPIYMFIIFSFMKPFE
KMNHDVMQSNSMVSSAIIEDINGIETIKSLTSEENRYQNIDSEFVDYLEKSFKLSKYSILQTSLKQGTKLVLNILILWFG
AQLVMSSKISIGQLITFNTLFSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENPVHSHFLMGDIEFDDLS
YKYGFGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKVLRRHINYLPQQAYIF
NGSILENLTLGGNHMISQEDILKACEVAEIRQDIERMPMGYQTQLSDGAGLSGGQKQRIALARALLTKSPVLILDEATSG
LDVLTEKKVIDNLMSLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK

Nucleotide

• Length: 1644 bp

>NTDB_id=1001859 ABC807_RS08475 WP_078133841.1 1623858..1625501(+) (comA/nlmT) [Streptococcus pneumoniae strain TL7/1993]
ATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTTCTTACTATCTCCAAGGAATCTTAGATGAATACAT
CCCAAATCAGATGAAATCAACTTTAGGAATCATCTCAGTTGGTCTGGTTATCACCTATATCCTCCAACAAGTCATGAGCT
TCTCCAGAGATTATCTCCTAACCGTTCTGAGCCAGAGATTAAGCATTGATGTGATTTTATCCTATATTCGCCATATTTTT
GAACTTCCCATGTCTTTCTTTGCGACACGTCGTACAGGAGAAATCATTTCACGGTTCACAGATGCTAACTCTATTATAGA
TGCCTTGGCTTCTACCATTCTTTCTCTTTTTCTGGATGTTTCTATTCTGATTCTTGTAGGGGGAGTCTTGCTGGCACAAA
ACCCTAATCTCTTCCTCCTTTCTCTTCTTTCCATTCCTATATACATGTTCATCATCTTTTCTTTTATGAAACCTTTCGAA
AAAATGAACCATGATGTCATGCAAAGTAATTCTATGGTTAGCTCTGCCATTATCGAAGATATCAACGGGATTGAAACTAT
AAAGTCGCTCACGAGTGAAGAAAATCGCTATCAAAATATAGACAGCGAATTTGTAGATTATTTGGAAAAATCCTTTAAGC
TCAGTAAATATTCTATTTTACAAACGAGTTTAAAGCAGGGAACAAAATTAGTTCTGAATATCCTTATCCTATGGTTTGGC
GCTCAATTAGTCATGTCAAGTAAAATTTCTATCGGTCAGCTGATTACCTTTAACACACTTTTTTCTTACTTTACAACTCC
TATGGAAAATATTATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCGCTAATAACCGTTTGAACGAAGTCTATCTAG
TCGAATCTGAATTTCAAGTTCAAGAAAACCCTGTTCATTCACATTTTTTGATGGGCGATATTGAATTTGATGACCTTTCT
TATAAGTATGGTTTTGGACGAGATACCTTAACAGATATTAATCTCACGATTAAACAAGGAGATAAGGTTAGCCTAGTTGG
AGTTAGTGGTTCTGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCTTTGAACCCTACAAAGGGCATATTTCCATCA
ATCATCAGGATATTAAAAACATTGATAAAAAAGTCTTGCGCCGTCATATTAATTACCTACCCCAACAAGCCTATATCTTT
AATGGCTCTATTTTGGAAAACTTAACCTTGGGCGGTAATCATATGATTAGTCAAGAAGATATTCTAAAAGCTTGTGAAGT
AGCTGAAATCCGTCAAGACATTGAAAGAATGCCTATGGGCTATCAAACTCAGCTCTCTGATGGAGCTGGTCTATCAGGAG
GACAGAAGCAACGAATCGCTCTCGCTCGTGCTCTTTTAACTAAATCTCCTGTTTTAATACTAGATGAAGCTACTAGCGGT
CTTGATGTCTTGACTGAGAAAAAAGTTATAGATAATCTTATGTCCCTAACTGATAAAACCATTCTCTTTGTAGCCCATCG
TCTCAGTATAGCCGAACGAACCAACCGTGTCATTGTTCTTGACCAGGGGAAAATCATTGAAGTTGGTAGCCACCAAGAGT
TAATGCAGGCGCAAGGTTTCTACCATCATCTATTCAATAAATAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (2-268)

• ABC transporter (ABC_tran) (330-479)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	72.894	99.817	0.728
comA	Streptococcus mitis NCTC 12261	67.459	100	0.675
comA	Streptococcus pneumoniae D39	67.093	100	0.671
comA	Streptococcus pneumoniae R6	67.093	100	0.671
comA	Streptococcus pneumoniae Rx1	67.093	100	0.671
comA	Streptococcus gordonii str. Challis substr. CH1	66.788	100	0.669
comA	Streptococcus mitis SK321	66.91	100	0.669
comA	Streptococcus pneumoniae TIGR4	66.728	100	0.667