Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   EL139_RS04315 Genome accession   NZ_LR134316
Coordinates   809981..810163 (+) Length   60 a.a.
NCBI ID   WP_111717696.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 804981..815163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL139_RS04285 (NCTC6181_00875) - 806032..807003 (+) 972 WP_011888780.1 Abi family protein -
  EL139_RS04290 (NCTC6181_00876) - 807126..808259 (+) 1134 WP_111714946.1 ISAs1 family transposase -
  EL139_RS04295 (NCTC6181_00878) - 808513..808713 (+) 201 WP_011888781.1 CsbD family protein -
  EL139_RS04300 (NCTC6181_00879) - 808811..808996 (-) 186 WP_111717699.1 XRE family transcriptional regulator -
  EL139_RS04305 (NCTC6181_00880) - 808998..809471 (-) 474 WP_111717698.1 hypothetical protein -
  EL139_RS04310 (NCTC6181_00881) - 809503..809811 (-) 309 WP_111717697.1 hypothetical protein -
  EL139_RS04315 (NCTC6181_00882) prx 809981..810163 (+) 183 WP_111717696.1 Paratox Regulator
  EL139_RS04320 (NCTC6181_00883) - 810394..811014 (-) 621 WP_111717695.1 alpha/beta hydrolase -
  EL139_RS04325 (NCTC6181_00884) - 811027..811635 (-) 609 WP_111717694.1 flavin reductase family protein -
  EL139_RS04330 (NCTC6181_00885) - 811811..812272 (-) 462 WP_231871986.1 VOC family protein -
  EL139_RS04335 (NCTC6181_00886) - 812405..814462 (-) 2058 WP_111717693.1 sodium:proton antiporter -
  EL139_RS04340 (NCTC6181_00887) - 814474..814734 (-) 261 WP_111717692.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6918.75 Da        Isoelectric Point: 3.9944

>NTDB_id=1001349 EL139_RS04315 WP_111717696.1 809981..810163(+) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
MLTYDEFKQAIDDGYIAGDTVTIVRKNGQIFDYVLPGEPVRQWEVVTEEVVGEVTRELER

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1001349 EL139_RS04315 WP_111717696.1 809981..810163(+) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGATGACGGATATATCGCAGGAGACACAGTCACGATTGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGCCTGGTGAGCCTGTGAGACAGTGGGAAGTAGTGACGGAGGAAGTGGTGGGAGAAG
TGACGAGAGAGTTAGAACGCTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS8232

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

71.667

100

0.717
  prx Streptococcus pyogenes MGAS315

71.667

100

0.717
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

85.714

70

0.6
  prx Streptococcus pyogenes MGAS315

78.049

68.333

0.533