Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   EL084_RS06255 Genome accession   NZ_LR134292
Coordinates   1274939..1275124 (-) Length   61 a.a.
NCBI ID   WP_126440532.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC10389     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1269939..1280124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL084_RS06235 (NCTC10389_01323) - 1270221..1270919 (-) 699 WP_115255394.1 3-oxoacyl-ACP reductase -
  EL084_RS06240 (NCTC10389_01324) - 1270912..1271148 (-) 237 WP_004232906.1 DUF2829 domain-containing protein -
  EL084_RS06245 (NCTC10389_01325) - 1271213..1272445 (-) 1233 WP_126440531.1 aminoacyltransferase -
  EL084_RS06250 (NCTC10389_01326) metG 1272648..1274648 (-) 2001 WP_004232912.1 methionine--tRNA ligase -
  EL084_RS06255 (NCTC10389_01327) prx 1274939..1275124 (-) 186 WP_126440532.1 Paratox Regulator
  EL084_RS06260 (NCTC10389_01328) - 1275364..1275777 (-) 414 WP_126440534.1 DUF1492 domain-containing protein -
  EL084_RS06265 (NCTC10389_01329) - 1276645..1277085 (-) 441 WP_126440536.1 hypothetical protein -
  EL084_RS06270 (NCTC10389_01330) - 1277087..1277275 (-) 189 WP_061408373.1 hypothetical protein -
  EL084_RS09030 (NCTC10389_01331) - 1277295..1277450 (-) 156 WP_164557731.1 hypothetical protein -
  EL084_RS09080 (NCTC10389_01332) - 1277791..1279236 (-) 1446 WP_174222078.1 phage/plasmid primase, P4 family -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 7167.25 Da        Isoelectric Point: 4.4000

>NTDB_id=1000348 EL084_RS06255 WP_126440532.1 1274939..1275124(-) (prx) [Streptococcus equinus strain NCTC10389]
MLYYDEFKEAIDRGFIKGDTVQIVRKNGIVFDYVLPNEPVKPHEVVTIEKVADVLEELKEW

Nucleotide


Download         Length: 186 bp        

>NTDB_id=1000348 EL084_RS06255 WP_126440532.1 1274939..1275124(-) (prx) [Streptococcus equinus strain NCTC10389]
ATGTTATATTATGATGAATTTAAAGAGGCAATCGATAGAGGCTTTATAAAGGGAGATACTGTTCAGATTGTTAGAAAAAA
TGGGATAGTATTTGATTATGTTTTGCCTAATGAACCAGTAAAGCCCCATGAGGTGGTCACCATTGAAAAGGTAGCAGACG
TTTTGGAAGAGTTGAAAGAATGGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

69.492

96.721

0.672
  prx Streptococcus pyogenes MGAS8232

69.492

96.721

0.672
  prx Streptococcus pyogenes MGAS315

68.966

95.082

0.656
  prx Streptococcus pyogenes MGAS315

63.793

95.082

0.607
  prx Streptococcus pyogenes MGAS315

75.61

67.213

0.508
  prx Streptococcus pyogenes MGAS315

72.093

70.492

0.508
  prx Streptococcus pyogenes MGAS315

70.732

67.213

0.475

Multiple sequence alignment