Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   EL070_RS02590 Genome accession   NZ_LR134284
Coordinates   479110..479289 (+) Length   59 a.a.
NCBI ID   WP_002983481.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8232     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 474110..484289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL070_RS02565 (NCTC8232_00508) - 475164..475595 (+) 432 WP_111705749.1 DUF1617 family protein -
  EL070_RS02570 (NCTC8232_00509) - 475598..476212 (+) 615 WP_011054672.1 DUF1366 domain-containing protein -
  EL070_RS02575 (NCTC8232_00510) - 476223..476678 (+) 456 WP_002983475.1 phage holin family protein -
  EL070_RS02580 (NCTC8232_00512) - 476790..478004 (+) 1215 WP_002983477.1 peptidoglycan amidohydrolase family protein -
  EL070_RS02585 (NCTC8232_00513) - 478249..479043 (+) 795 WP_002983479.1 DNA/RNA non-specific endonuclease -
  EL070_RS02590 (NCTC8232_00514) prx 479110..479289 (+) 180 WP_002983481.1 hypothetical protein Regulator
  EL070_RS02595 (NCTC8232_00515) rimP 479534..480070 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  EL070_RS02600 (NCTC8232_00516) nusA 480245..481402 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  EL070_RS02605 (NCTC8232_00517) rnpM 481418..481714 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  EL070_RS02610 (NCTC8232_00518) - 481707..482009 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 59 a.a.        Molecular weight: 6917.86 Da        Isoelectric Point: 4.1813

>NTDB_id=1000017 EL070_RS02590 WP_002983481.1 479110..479289(+) (prx) [Streptococcus pyogenes strain NCTC8232]
MLTYDEFKQAIDRGYIVEDTVTIVRKNGQIFDYVLPHEKVKNGEVVTDEKVEEVLMELE

Nucleotide


Download         Length: 180 bp        

>NTDB_id=1000017 EL070_RS02590 WP_002983481.1 479110..479289(+) (prx) [Streptococcus pyogenes strain NCTC8232]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGACCGTGGATATATCGTAGAAGACACAGTCACGATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACAGACGAAAAAGTAGAAGAAG
TGCTGATGGAATTGGAGTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

87.931

98.305

0.864

  prx Streptococcus pyogenes MGAS8232

87.931

98.305

0.864

  prx Streptococcus pyogenes MGAS315

79.661

100

0.797

  prx Streptococcus pyogenes MGAS315

71.186

100

0.712

  prx Streptococcus pyogenes MGAS315

86.047

72.881

0.627

  prx Streptococcus pyogenes MGAS315

87.805

69.492

0.61

  prx Streptococcus pyogenes MGAS315

76.19

71.186

0.542


Multiple sequence alignment