NT genes of 'Conchiformibius steedae DSM 2580'
In this species, transformation by exogenous DNA is regulated by the presence of a specific DNA Uptake Sequence (DUS) (PMID: 23637627).
| Gene name | Gene type | Function | Related MGE | Organism | Genome accession | Locus tag | Protein ID |
|---|---|---|---|---|---|---|---|
 comL |
Machinery gene | DNA binding and uptake | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS00150 | WP_027021499.1 |
| pilT |
Machinery gene | DNA binding and uptake | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS01875 | WP_027021800.1 |
| comA |
Machinery gene | DNA processing DNA binding and uptake | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS02530 | WP_027021909.1 |
| radA |
Machinery gene | Homologous recombination | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS04225 | WP_027021985.1 |
| recC |
Machinery gene | Homologous recombination | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS04285 | WP_027021973.1 |
| dprA |
Machinery gene | DNA processing | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS04380 | WP_027022409.1 |
| pilA |
Machinery gene | DNA binding and uptake | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS04615 | WP_420838888.1 |
| recA |
Machinery gene | Homologous recombination | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS07485 | WP_027022459.1 |
| pilD |
Machinery gene | DNA binding and uptake | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS08120 | WP_027021065.1 |
| pilG |
Machinery gene | DNA binding and uptake | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS08125 | WP_027021066.1 |
| pilF |
Machinery gene | DNA binding and uptake | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS08130 | WP_027021067.1 |
| comM |
Machinery gene | DNA processing | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS09035 | WP_027021219.1 |
| ssb |
Machinery gene | DNA processing | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS09795 | WP_027021356.1 |
| recB |
Machinery gene | Homologous recombination | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS09975 | WP_027021387.1 |
| recX |
Regulator | Competence regulation | - | Conchiformibius steedae DSM 2580 | NZ_CP097501 | LNQ82_RS10170 | WP_027021417.1 |
Experimentally validated
Bioinformatically predicted