MGE detailed information
MGE type: Prophage MGE length: 58206 bp
Accession: NZ_LS997868 Location: 577112..635317 Organism: Vibrio cholerae strain NCTC 30 Replicon: chromosome
Accession: NZ_LS997868 Location: 577112..635317 Organism: Vibrio cholerae strain NCTC 30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5R51_RS16630 () | 572241..572528 | + | 288 | WP_000221356.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5R51_RS16635 () | 572565..572654 | + | 90 | WP_119091940.1 | hypothetical protein | - |
| D5R51_RS16640 () | 572828..573009 | + | 182 | Protein_549 | DUF645 family protein | - |
| D5R51_RS16645 () | 573041..573616 | + | 576 | WP_162892120.1 | DUF2971 domain-containing protein | - |
| D5R51_RS16650 () | 573840..573968 | + | 129 | WP_080388421.1 | DUF3265 domain-containing protein | - |
| D5R51_RS16655 () | 574069..574323 | + | 255 | WP_001223794.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| D5R51_RS16660 () | 574316..574579 | + | 264 | WP_000098715.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| D5R51_RS16670 () | 574832..575092 | + | 261 | WP_162892167.1 | DUF3709 domain-containing protein | - |
| D5R51_RS16675 () | 575511..575729 | + | 219 | WP_162892121.1 | DUF3709 domain-containing protein | - |
| D5R51_RS16680 () | 576012..576395 | + | 384 | WP_001081300.1 | hypothetical protein | - |
| D5R51_RS16685 () | 576539..577036 | + | 498 | WP_000259904.1 | GNAT family N-acetyltransferase | - |
| D5R51_RS16690 () | 577112..578292 | + | 1181 | WP_119091239.1 | IS3 family transposase ISAlg | Transposase |
| D5R51_RS16705 () | 579879..580331 | + | 453 | WP_119091943.1 | hypothetical protein | - |
| D5R51_RS16715 () | 580456..580755 | - | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5R51_RS16720 () | 580752..580994 | - | 243 | WP_001107720.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| D5R51_RS16730 () | 581364..581684 | + | 321 | WP_119091944.1 | DUF645 family protein | - |
| D5R51_RS16745 () | 582101..582766 | + | 666 | WP_119091946.1 | site-specific DNA-methyltransferase | - |
| D5R51_RS16750 () | 582925..583506 | + | 582 | WP_114813644.1 | hypothetical protein | - |
| D5R51_RS16755 () | 583503..583613 | + | 111 | WP_119092152.1 | DUF3265 domain-containing protein | - |
| D5R51_RS16760 () | 583799..583981 | + | 183 | WP_000923340.1 | DUF645 family protein | - |
| D5R51_RS16765 () | 584241..585137 | + | 897 | WP_097353652.1 | helix-turn-helix transcriptional regulator | - |
| D5R51_RS16770 () | 585263..586303 | + | 1041 | WP_119091947.1 | IS481 family transposase ISVvu4 | Transposase |
| D5R51_RS16775 () | 586578..586949 | + | 372 | WP_001008379.1 | hypothetical protein | - |
| D5R51_RS16785 () | 587079..587396 | - | 318 | WP_000077274.1 | CcdB family protein | - |
| D5R51_RS16790 () | 587396..587641 | - | 246 | WP_119091949.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| D5R51_RS16795 () | 587839..588180 | + | 342 | WP_119091923.1 | hypothetical protein | - |
| D5R51_RS16800 () | 588191..588286 | + | 96 | Protein_574 | DUF3265 domain-containing protein | - |
| D5R51_RS16805 () | 588472..588654 | + | 183 | WP_119091950.1 | DUF645 family protein | - |
| D5R51_RS16810 () | 588914..589195 | + | 282 | WP_000086649.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D5R51_RS16815 () | 589192..589479 | + | 288 | WP_119091951.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5R51_RS16820 () | 589581..589765 | + | 185 | Protein_578 | DUF3709 domain-containing protein | - |
| D5R51_RS16825 () | 589762..589995 | + | 234 | WP_033930090.1 | DUF3709 domain-containing protein | - |
| D5R51_RS19010 () | 590424..590628 | + | 205 | Protein_580 | DUF645 family protein | - |
| D5R51_RS16845 () | 590882..591169 | + | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5R51_RS16850 () | 591180..591497 | + | 318 | WP_119091955.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| D5R51_RS16855 () | 591650..592273 | + | 624 | WP_000247072.1 | DUF1349 domain-containing protein | - |
| D5R51_RS16860 () | 592435..592887 | + | 453 | WP_044128081.1 | GNAT family N-acetyltransferase | - |
| D5R51_RS16870 () | 593034..593573 | + | 540 | WP_084997774.1 | hydrolase | - |
| D5R51_RS16875 () | 593771..594001 | - | 231 | WP_000838533.1 | PAS factor family protein | - |
| D5R51_RS16885 () | 594381..594560 | + | 180 | WP_119092153.1 | DUF645 family protein | - |
| D5R51_RS16890 () | 594711..595082 | + | 372 | WP_185835254.1 | DUF4144 domain-containing protein | - |
| D5R51_RS16895 () | 595248..596615 | - | 1368 | WP_119091958.1 | Fic family protein | - |
| D5R51_RS16900 () | 596717..596857 | + | 141 | WP_083806583.1 | DUF3265 domain-containing protein | - |
| D5R51_RS16910 () | 597045..597223 | + | 179 | Protein_591 | DUF645 family protein | - |
| D5R51_RS16915 () | 597488..597739 | + | 252 | WP_001250180.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D5R51_RS16920 () | 597729..598016 | + | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5R51_RS16930 () | 598176..598805 | + | 630 | WP_114829152.1 | hypothetical protein | - |
| D5R51_RS16935 () | 599019..599309 | + | 291 | WP_119092154.1 | YkgJ family cysteine cluster protein | - |
| D5R51_RS16940 () | 599541..599930 | + | 390 | WP_162892123.1 | VOC family protein | - |
| D5R51_RS16945 () | 600126..600449 | + | 324 | WP_114780077.1 | DUF3709 domain-containing protein | - |
| D5R51_RS16950 () | 600774..601052 | + | 279 | Protein_598 | flavodoxin family protein | - |
| D5R51_RS16955 () | 601109..601204 | + | 96 | WP_119091959.1 | acetyltransferase | - |
| D5R51_RS16960 () | 601236..601649 | + | 414 | WP_002029857.1 | VOC family protein | - |
| D5R51_RS16970 () | 601854..602567 | + | 714 | WP_185835382.1 | Fic family protein | - |
| D5R51_RS16980 () | 602837..603073 | + | 237 | WP_162810550.1 | DUF3709 domain-containing protein | - |
| D5R51_RS16990 () | 603407..603631 | + | 225 | Protein_603 | VOC family protein | - |
| D5R51_RS16995 () | 603948..604118 | + | 171 | Protein_604 | DUF645 family protein | - |
| D5R51_RS17005 () | 604315..604584 | - | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| D5R51_RS17010 () | 604577..604855 | - | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| D5R51_RS17020 () | 605209..605391 | + | 183 | WP_072668508.1 | DUF645 family protein | - |
| D5R51_RS17025 () | 605723..605893 | + | 171 | WP_113600562.1 | DUF3709 domain-containing protein | - |
| D5R51_RS17030 () | 606226..606642 | + | 417 | WP_119091961.1 | DUF1311 domain-containing protein | - |
| D5R51_RS17040 () | 606809..607111 | + | 303 | Protein_610 | isochorismatase family protein | - |
| D5R51_RS17045 () | 607167..608208 | - | 1042 | Protein_611 | IS481 family transposase ISVvu4 | Transposase |
| D5R51_RS17050 () | 608317..608562 | + | 246 | Protein_612 | isochorismatase family protein | - |
| D5R51_RS17055 () | 608736..609149 | + | 414 | WP_119091962.1 | GNAT family N-acetyltransferase | - |
| D5R51_RS17060 () | 609260..609444 | + | 185 | Protein_614 | DUF3709 domain-containing protein | - |
| D5R51_RS17065 () | 609441..609674 | + | 234 | WP_033930090.1 | DUF3709 domain-containing protein | - |
| D5R51_RS17070 () | 609969..610271 | + | 303 | WP_119091963.1 | hypothetical protein | - |
| D5R51_RS17075 () | 610394..610684 | - | 291 | WP_076008724.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5R51_RS17080 () | 610674..610922 | - | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D5R51_RS17090 () | 611201..611457 | + | 257 | Protein_619 | DUF645 family protein | - |
| D5R51_RS17100 () | 611652..612146 | + | 495 | WP_119091965.1 | GNAT family N-acetyltransferase | - |
| D5R51_RS17105 () | 612255..613295 | + | 1041 | WP_057645437.1 | IS481 family transposase ISVvu4 | Transposase |
| D5R51_RS17110 () | 613355..613915 | + | 561 | Protein_622 | hypothetical protein | - |
| D5R51_RS17115 () | 613939..614049 | + | 111 | WP_071936869.1 | DUF3265 domain-containing protein | - |
| D5R51_RS17120 () | 614124..614435 | + | 312 | WP_162892124.1 | DUF3709 domain-containing protein | - |
| D5R51_RS17125 () | 614755..615021 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| D5R51_RS17130 () | 615008..615253 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| D5R51_RS17140 () | 615392..615862 | - | 471 | WP_119091966.1 | RES family NAD+ phosphorylase | - |
| D5R51_RS17145 () | 615862..616314 | - | 453 | WP_119091967.1 | DUF2384 domain-containing protein | - |
| D5R51_RS17150 () | 616421..617212 | - | 792 | Protein_629 | IS110 family transposase ISSde13 | Transposase |
| D5R51_RS17155 () | 617530..618516 | - | 987 | WP_001170903.1 | Sulfate-binding protein | VF |
| D5R51_RS17160 () | 619182..619409 | + | 228 | WP_119091968.1 | hypothetical protein | - |
| D5R51_RS17165 () | 619527..620631 | + | 1105 | Protein_632 | hypothetical protein | - |
| D5R51_RS19015 () | 620647..620823 | - | 177 | WP_162892125.1 | hypothetical protein | - |
| D5R51_RS17170 () | 620971..623091 | + | 2121 | WP_119091969.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| D5R51_RS17175 () | 623096..623563 | + | 468 | WP_001106209.1 | anaerobic ribonucleoside-triphosphate reductase-activating protein | - |
| D5R51_RS17180 () | 623685..624866 | + | 1182 | WP_119091970.1 | aspartate/tyrosine/aromatic aminotransferase | - |
| D5R51_RS17185 () | 624924..625607 | + | 684 | WP_113611674.1 | RimK/LysX family protein | - |
| D5R51_RS17190 () | 625841..627577 | - | 1737 | WP_162892126.1 | PTS fructose transporter subunit IIBC | - |
| D5R51_RS17195 () | 627596..628549 | - | 954 | WP_000163398.1 | 1-phosphofructokinase | - |
| D5R51_RS17200 () | 628560..629762 | - | 1203 | WP_119091972.1 | fused PTS fructose transporter subunit IIA/HPr protein | - |
| D5R51_RS17205 () | 630101..631081 | + | 981 | WP_119091973.1 | Catabolite repressor/activator | VF |
| D5R51_RS17210 () | 631135..632274 | + | 1140 | WP_119091974.1 | exonuclease SbcCD subunit D | - |
| D5R51_RS17215 () | 632276..635317 | + | 3042 | WP_119091975.1 | SMC family ATPase | - |
| D5R51_RS17220 () | 635494..637476 | + | 1983 | WP_032480204.1 | response regulator | - |
| D5R51_RS17225 () | 637578..638747 | - | 1170 | WP_001039919.1 | quorum-sensing autoinducer CAI-1 synthase | - |
| D5R51_RS17230 () | 638944..639906 | - | 963 | WP_001104012.1 | TDT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|