MGE detailed information

MGE type: Conjugative plasmid        MGE length: 182456 bp
Accession: NZ_CP104540        Location: 1..182456         Organism: Escherichia coli strain E6       Replicon: plasmid p1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N5O76_RS23660 (1) 1..978 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
N5O76_RS23665 (1263) 1263..2003 - 741 WP_001066954.1 tyrosine-type recombinase/integrase -
N5O76_RS23670 (2124) 2124..2312 - 189 WP_014640565.1 hypothetical protein -
N5O76_RS23675 (2686) 2686..3588 - 903 WP_001312822.1 hypothetical protein VF
N5O76_RS23680 (3657) 3657..4766 - 1110 WP_000771475.1 SDR family oxidoreductase -
N5O76_RS23685 (5199) 5199..6152 - 954 WP_000280980.1 Protease 7 VF
N5O76_RS23690 (7449) 7449..7628 - 180 Protein_6 transposase -
N5O76_RS23695 (7767) 7767..8980 + 1214 WP_191638310.1 IS3 family transposase IS629 Transposase
N5O76_RS23700 (9128) 9128..9453 - 326 Protein_8 IS3 family transposase ISLad1 Transposase
N5O76_RS23705 (9499) 9499..9839 + 341 Protein_9 IS3 family transposase -
N5O76_RS23710 (10434) 10434..11621 + 1188 WP_000928803.1 efflux RND transporter periplasmic adaptor subunit -
N5O76_RS23715 (11618) 11618..13558 + 1941 WP_000733250.1 Macrolide export ATP-binding/permease protein MacB VF
N5O76_RS23720 (13562) 13562..14932 + 1371 WP_001312828.1 efflux transporter outer membrane subunit -
N5O76_RS23725 (15406) 15406..15600 + 195 Protein_13 IS200-IS605 family transposase IS200C Transposase
N5O76_RS23730 (15729) 15729..16670 - 942 WP_000974762.1 hypothetical protein -
N5O76_RS23735 (16905) 16905..18294 - 1390 Protein_15 ISNCY family transposase ISKpn21 Transposase
N5O76_RS23740 (18604) 18604..18753 - 150 Protein_16 IS3 family transposase IS2 Transposase
N5O76_RS23745 (18931) 18931..20124 - 1194 WP_000450495.1 GTP-binding protein -
N5O76_RS23750 (21348) 21348..22576 - 1229 Protein_18 IS3 family transposase -
N5O76_RS23755 (23203) 23203..23496 + 294 WP_000738422.1 increased serum survival lipoprotein Iss -
N5O76_RS23760 (23554) 23554..23753 - 200 Protein_20 lysis protein -
N5O76_RS23765 (24307) 24307..25325 + 1019 Protein_21 integrase core domain-containing protein -
N5O76_RS23770 (26636) 26636..27751 + 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
N5O76_RS23775 (27891) 27891..31550 + 3660 WP_001111199.1 Multidrug efflux ATP-binding/permease protein VF
N5O76_RS23780 (31654) 31654..32883 + 1230 WP_000933675.1 Enterochelin esterase VF
N5O76_RS23785 (32968) 32968..33924 + 957 WP_000271276.1 Ferri-bacillibactin esterase BesA VF
N5O76_RS23790 (33969) 33969..36146 - 2178 WP_001222186.1 Ferric enterobactin receptor VF
N5O76_RS23795 (37001) 37001..37135 - 135 WP_249531455.1 hypothetical protein -
N5O76_RS23800 (37095) 37095..38036 - 942 WP_001312841.1 3-deoxy-7-phosphoheptulonate synthase -
N5O76_RS23805 (38217) 38217..38517 + 301 Protein_29 hypothetical protein -
N5O76_RS23810 (38595) 38595..38942 - 348 WP_000142437.1 DUF6404 family protein -
N5O76_RS23815 (39244) 39244..39726 - 483 WP_001311056.1 hypothetical protein -
N5O76_RS23820 (39843) 39843..40691 - 849 WP_001058005.1 3'-5' exonuclease -
N5O76_RS23825 (40737) 40737..41015 - 279 WP_097309154.1 type II toxin-antitoxin system toxin YacB Toxin Detail
N5O76_RS23830 (41015) 41015..41284 - 270 WP_000079941.1 type II toxin-antitoxin system antitoxin YacA Antitoxin Detail
N5O76_RS23835 (41806) 41806..43034 + 1229 WP_112030635.1 IS3 family transposase IS2 Transposase
N5O76_RS23840 (43264) 43264..44504 + 1241 Protein_36 HlyD family secretion protein -
N5O76_RS23845 (44611) 44611..44883 + 273 Protein_37 IS4 family transposase IS421 Transposase
N5O76_RS23850 (45064) 45064..46050 + 987 Protein_38 IS4 family transposase IS421 Transposase
N5O76_RS23855 (46674) 46674..46877 - 204 Protein_39 hypothetical protein -
N5O76_RS23860 (47050) 47050..47217 + 168 Protein_40 colicin-B -
N5O76_RS23865 (47235) 47235..47762 - 528 WP_000203272.1 colicin B immunity protein -
N5O76_RS23870 (48006) 48006..48821 + 816 WP_001312845.1 lipid II-degrading bacteriocin colicin M -
N5O76_RS23875 (48871) 48871..49224 - 354 WP_000864812.1 colicin M immunity protein -
N5O76_RS23880 (49402) 49402..50193 - 792 WP_000016494.1 site-specific integrase -
N5O76_RS23885 (50190) 50190..50879 - 690 WP_000796229.1 hypothetical protein -
N5O76_RS23890 (50923) 50923..51273 - 351 WP_000493379.1 hypothetical protein -
N5O76_RS23895 (51835) 51835..52065 + 231 WP_001261287.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
N5O76_RS23900 (52062) 52062..52478 + 417 WP_001044768.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
N5O76_RS23905 (52640) 52640..54778 - 2139 WP_000350635.1 AAA family ATPase -
N5O76_RS23910 (55136) 55136..56307 + 1172 WP_094284492.1 IS91 family transposase ISSbo1 Transposase
N5O76_RS23915 (56470) 56470..56709 - 240 WP_001105068.1 hypothetical protein -
N5O76_RS23920 (56815) 56815..57090 - 276 WP_000421266.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
N5O76_RS23925 (57090) 57090..57374 - 285 WP_012006537.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
N5O76_RS23930 (57875) 57875..58066 + 192 Protein_54 recombinase family protein -
N5O76_RS23935 (58133) 58133..58837 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
N5O76_RS23940 (58883) 58883..59293 + 411 Protein_56 Tn3 family transposase TnpR_ISSba14 Transposase
N5O76_RS23945 (59340) 59340..59498 + 159 Protein_57 integrase core domain-containing protein -
N5O76_RS23950 (59648) 59648..60646 + 999 WP_000756335.1 ABC transporter substrate-binding protein -
N5O76_RS23955 (60646) 60646..61683 + 1038 WP_000110580.1 Hemin transport system permease protein HmuU VF
N5O76_RS23960 (61683) 61683..62444 + 762 WP_000020503.1 Fe(3+) dicitrate transport ATP-binding protein FecE VF
N5O76_RS23965 (62501) 62501..63688 + 1188 WP_160348040.1 MFS transporter -
N5O76_RS23970 (63781) 63781..64974 - 1194 Protein_62 IS3 family transposase IS629 Transposase
N5O76_RS23975 (65121) 65121..68618 - 3498 WP_160348039.1 Outer membrane protein IcsA autotransporter VF
N5O76_RS23985 (70140) 70140..71678 - 1539 WP_096965644.1 IS66 family transposase ISEc8 Transposase
N5O76_RS23990 (71728) 71728..72075 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
N5O76_RS23995 (72072) 72072..72452 - 381 WP_001171554.1 IS66 family transposase ISEc8 Transposase
N5O76_RS24000 (72821) 72821..74392 - 1572 WP_000381395.1 IS66 family transposase ISCro1 Transposase
N5O76_RS24005 (74412) 74412..74759 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
N5O76_RS24010 (74759) 74759..75436 - 678 WP_001682408.1 IS66 family transposase ISCro1 Transposase
N5O76_RS24015 (75751) 75751..75948 + 198 WP_000215657.1 hypothetical protein -
N5O76_RS24020 (75945) 75945..76229 - 285 WP_000642771.1 hypothetical protein -
N5O76_RS24025 (76249) 76249..77382 - 1134 WP_000545983.1 DUF3800 domain-containing protein -
N5O76_RS24030 (77922) 77922..79160 + 1239 WP_012006540.1 3-oxo-glucose-6-phosphate:glutamate aminotransferase VF
N5O76_RS24035 (79144) 79144..79971 + 828 WP_000154003.1 HAD-IIB family hydrolase -
N5O76_RS24040 (79974) 79974..80990 + 1017 WP_000583428.1 Gfo/Idh/MocA family oxidoreductase -
N5O76_RS24045 (80992) 80992..81261 + 270 WP_000379710.1 SemiSWEET transporter -
N5O76_RS24050 (81258) 81258..82790 + 1533 WP_001017349.1 NAD(P)-binding domain-containing protein -
N5O76_RS24055 (82822) 82822..83274 - 453 WP_000670960.1 acyltransferase -
N5O76_RS24060 (83636) 83636..83866 + 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
N5O76_RS24065 (83863) 83863..84279 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
N5O76_RS24070 (84354) 84354..85919 + 1566 WP_001128474.1 AAA family ATPase -
N5O76_RS24075 (85904) 85904..86926 + 1023 WP_000361402.1 helicase UvrD -
N5O76_RS24085 (87760) 87760..91893 - 4134 WP_121869167.1 Hemoglobin-binding protease hbp autotransporter VF
N5O76_RS24090 (92162) 92162..93375 + 1214 WP_191638310.1 IS3 family transposase IS629 Transposase
N5O76_RS24095 (93644) 93644..93931 - 288 WP_000222766.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
N5O76_RS24100 (93928) 93928..94179 - 252 WP_001132900.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
N5O76_RS24105 (95142) 95142..95999 - 858 WP_000774297.1 incFII family plasmid replication initiator RepA -
N5O76_RS24110 (95992) 95992..96474 - 483 WP_001273588.1 hypothetical protein -
N5O76_RS24115 (96467) 96467..96514 - 48 WP_229471593.1 hypothetical protein -
N5O76_RS24120 (96505) 96505..96756 + 252 WP_223195197.1 replication protein RepA -
N5O76_RS24125 (96773) 96773..97030 - 258 WP_000083845.1 replication regulatory protein RepA -
N5O76_RS24130 (97314) 97314..97463 - 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
- (97507) 97507..97568 + 62 NuclAT_1 - -
- (97507) 97507..97568 + 62 NuclAT_1 - -
- (97507) 97507..97568 + 62 NuclAT_1 - -
- (97507) 97507..97568 + 62 NuclAT_1 - -
N5O76_RS24135 (97824) 97824..97898 - 75 Protein_95 endonuclease -
N5O76_RS24140 (98144) 98144..98356 - 213 WP_001299730.1 ANR family transcriptional regulator -
N5O76_RS24145 (98492) 98492..99052 - 561 WP_000139315.1 fertility inhibition protein FinO -
N5O76_RS24150 (99155) 99155..100015 - 861 WP_000704513.1 putative protein YcjY VF
N5O76_RS24155 (100074) 100074..100820 - 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
N5O76_RS24160 (100840) 100840..106110 - 5271 WP_000986968.1 Multifunctional conjugation protein TraI Relaxase
N5O76_RS24165 (106192) 106192..106419 + 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
N5O76_RS24170 (106419) 106419..106817 + 399 WP_000911333.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
N5O76_RS24175 (106826) 106826..108979 - 2154 WP_000009325.1 type IV conjugative transfer system coupling protein TraD -
N5O76_RS24180 (109232) 109232..109963 - 732 WP_000850422.1 conjugal transfer complement resistance protein TraT -
N5O76_RS24185 (109977) 109977..110486 - 510 WP_096965639.1 conjugal transfer entry exclusion protein TraS -
N5O76_RS24190 (110483) 110483..113308 - 2826 WP_001007037.1 conjugal transfer mating-pair stabilization protein TraG -
N5O76_RS24195 (113305) 113305..114678 - 1374 WP_000944319.1 conjugal transfer pilus assembly protein TraH -
N5O76_RS24200 (114665) 114665..115057 - 393 Protein_108 F-type conjugal transfer protein TrbF -
N5O76_RS24205 (115044) 115044..115385 - 342 WP_001442101.1 P-type conjugative transfer protein TrbJ -
N5O76_RS24210 (115315) 115315..115860 - 546 WP_000059833.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
N5O76_RS24215 (115847) 115847..116131 - 285 WP_000624108.1 type-F conjugative transfer system pilin chaperone TraQ -
N5O76_RS24220 (116334) 116334..117080 - 747 WP_001016257.1 IS21 family transposase ISEc12 Transposase
N5O76_RS24225 (117095) 117095..118636 - 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
N5O76_RS24230 (118882) 118882..119157 + 276 WP_001513501.1 hypothetical protein -
N5O76_RS24235 (119159) 119159..119506 - 348 WP_001287907.1 conjugal transfer protein TrbA -
N5O76_RS24240 (119522) 119522..120265 - 744 WP_001030367.1 type-F conjugative transfer system pilin assembly protein TraF -
N5O76_RS24245 (120258) 120258..120515 - 258 WP_000864318.1 conjugal transfer protein TrbE -
N5O76_RS24250 (120542) 120542..122350 - 1809 WP_000821847.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
N5O76_RS24255 (122347) 122347..122985 - 639 WP_000777688.1 type-F conjugative transfer system pilin assembly protein TrbC -
N5O76_RS24260 (122994) 122994..123986 - 993 WP_000830187.1 conjugal transfer pilus assembly protein TraU -
N5O76_RS24265 (123983) 123983..124615 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
N5O76_RS24270 (124612) 124612..124998 - 387 WP_000097320.1 type-F conjugative transfer system protein TrbI -
N5O76_RS24275 (124995) 124995..127622 - 2628 WP_001064247.1 type IV secretion system protein TraC -
N5O76_RS24280 (127782) 127782..128003 - 222 WP_001278689.1 conjugal transfer protein TraR -
N5O76_RS24285 (128138) 128138..128653 - 516 WP_000809841.1 type IV conjugative transfer system lipoprotein TraV -
N5O76_RS24290 (128650) 128650..128901 - 252 WP_001038342.1 conjugal transfer protein TrbG -
N5O76_RS24295 (128913) 128913..129110 - 198 WP_001324648.1 conjugal transfer protein TrbD -
N5O76_RS24300 (129097) 129097..129687 - 591 WP_000002792.1 conjugal transfer pilus-stabilizing protein TraP -
N5O76_RS24305 (129677) 129677..131104 - 1428 WP_000146692.1 F-type conjugal transfer pilus assembly protein TraB -
N5O76_RS24310 (131104) 131104..131832 - 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
N5O76_RS24315 (131819) 131819..132385 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
N5O76_RS24320 (132407) 132407..132718 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
N5O76_RS24325 (132733) 132733..133098 - 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
N5O76_RS24330 (133131) 133131..133532 - 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
N5O76_RS24335 (133625) 133625..134314 - 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
N5O76_RS24340 (134501) 134501..134884 - 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
N5O76_RS24345 (135205) 135205..135807 + 603 WP_000243709.1 hypothetical protein VF
N5O76_RS24350 (136104) 136104..136925 - 822 WP_001234469.1 DUF932 domain-containing protein -
N5O76_RS24355 (137046) 137046..137333 - 288 WP_000107535.1 hypothetical protein -
N5O76_RS24360 (137358) 137358..137564 - 207 WP_000547939.1 hypothetical protein -
N5O76_RS24365 (137634) 137634..137807 + 174 Protein_141 hypothetical protein -
N5O76_RS24370 (137805) 137805..138035 - 231 WP_001426396.1 hypothetical protein -
N5O76_RS24375 (138255) 138255..138380 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
N5O76_RS24380 (138322) 138322..138471 - 150 Protein_144 plasmid maintenance protein Mok -
- (138457) 138457..138681 - 225 NuclAT_0 - -
- (138457) 138457..138681 - 225 NuclAT_0 - -
- (138457) 138457..138681 - 225 NuclAT_0 - -
- (138457) 138457..138681 - 225 NuclAT_0 - -
N5O76_RS24385 (138493) 138493..138681 + 189 WP_001299721.1 hypothetical protein -
N5O76_RS24390 (138650) 138650..139412 - 763 Protein_146 plasmid SOS inhibition protein A -
N5O76_RS24395 (139409) 139409..139843 - 435 WP_000845949.1 conjugation system SOS inhibitor PsiB -
N5O76_RS24400 (139898) 139898..141856 - 1959 WP_160348044.1 ParB/RepB/Spo0J family partition protein -
N5O76_RS24405 (141915) 141915..142148 - 234 WP_000006004.1 DUF905 domain-containing protein -
N5O76_RS24410 (142204) 142204..142689 - 486 WP_042029316.1 single-stranded DNA-binding protein -
N5O76_RS24415 (142839) 142839..144740 - 1902 WP_000936285.1 group II intron reverse transcriptase/maturase -
N5O76_RS24420 (145231) 145231..146802 - 1572 WP_261306643.1 IS66 family transposase ISCro1 Transposase
N5O76_RS24425 (146822) 146822..147169 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
N5O76_RS24430 (147169) 147169..147846 - 678 WP_001682408.1 IS66 family transposase ISCro1 Transposase
N5O76_RS24435 (148125) 148125..148331 - 207 WP_044152090.1 hypothetical protein -
N5O76_RS24440 (148572) 148572..148817 - 246 WP_071533131.1 hypothetical protein -
N5O76_RS24445 (148969) 148969..149532 - 564 WP_099588285.1 class I SAM-dependent methyltransferase -
N5O76_RS24450 (149580) 149580..150941 - 1362 WP_000170675.1 DUF3560 domain-containing protein -
N5O76_RS24455 (150993) 150993..151223 - 231 WP_000218642.1 hypothetical protein -
N5O76_RS24460 (151740) 151740..151993 + 254 Protein_160 hypothetical protein -
N5O76_RS24465 (152217) 152217..152399 - 183 WP_001027505.1 hypothetical protein -
N5O76_RS24470 (152399) 152399..152860 - 462 WP_042007484.1 DUF1380 family protein -
N5O76_RS24475 (152860) 152860..153285 - 426 WP_001198922.1 antirestriction protein -
N5O76_RS24480 (153428) 153428..154540 + 1113 WP_021513474.1 IS4 family transposase IS421 Transposase
N5O76_RS24485 (154733) 154733..154902 - 170 Protein_165 hypothetical protein -
N5O76_RS24490 (155539) 155539..156510 - 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
N5O76_RS24495 (156510) 156510..157676 - 1167 WP_001238646.1 Sporulation initiation inhibitor protein Soj VF
N5O76_RS24505 (158770) 158770..158937 - 168 WP_000638861.1 hypothetical protein -
N5O76_RS24510 (159187) 159187..160689 - 1503 WP_000715078.1 hypothetical protein -
N5O76_RS24515 (161085) 161085..161234 - 150 WP_169051996.1 hypothetical protein -
N5O76_RS24520 (161342) 161342..161767 - 426 WP_012300440.1 hypothetical protein -
N5O76_RS24525 (161909) 161909..162388 + 480 WP_000190054.1 hypothetical protein -
N5O76_RS24530 (162828) 162828..163490 + 663 WP_000163251.1 hypothetical protein -
N5O76_RS24540 (164723) 164723..166924 - 2202 WP_000973517.1 Ferric aerobactin receptor VF
N5O76_RS24545 (166950) 166950..168283 - 1334 Protein_177 L-lysine N6-monooxygenase VF
N5O76_RS24550 (168280) 168280..170022 - 1743 WP_001015721.1 Aerobactin synthase VF
N5O76_RS24555 (170022) 170022..170969 - 948 WP_000011907.1 N(6)-hydroxylysine O-acetyltransferase VF
N5O76_RS24560 (170970) 170970..172694 - 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
N5O76_RS24565 (172830) 172830..174023 + 1194 WP_000095526.1 MFS transporter -
N5O76_RS24570 (174403) 174403..174783 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
N5O76_RS24575 (175124) 175124..175537 - 414 Protein_183 phosphopyruvate hydratase -
N5O76_RS24580 (175535) 175535..175792 + 258 Protein_184 transposase -
N5O76_RS24585 (176026) 176026..176883 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
N5O76_RS24590 (176880) 176880..177737 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
N5O76_RS24595 (177734) 177734..178561 - 828 WP_000983712.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
N5O76_RS24600 (178561) 178561..179475 - 915 WP_000949004.1 Putative metal ABC transporter substrate-binding protein Hpf VF
N5O76_RS24605 (179831) 179831..180528 + 698 WP_223155668.1 IS1 family transposase IS1S Transposase
N5O76_RS24610 (180708) 180708..181221 - 514 Protein_190 DUF4113 domain-containing protein -
N5O76_RS24615 (181282) 181282..181386 - 105 Protein_191 AAA family ATPase -
N5O76_RS24620 (181388) 181388..181711 - 324 Protein_192 IS21 family transposase IS21 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance