Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | parDE/RelE-RHH |
| Location | 40737..41284 | Replicon | plasmid p1 |
| Accession | NZ_CP104540 | ||
| Organism | Escherichia coli strain E6 | ||
Toxin (Protein)
| Gene name | parE | Uniprot ID | - |
| Locus tag | N5O76_RS23825 | Protein ID | WP_097309154.1 |
| Coordinates | 40737..41015 (-) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | parD | Uniprot ID | E1QMW3 |
| Locus tag | N5O76_RS23830 | Protein ID | WP_000079941.1 |
| Coordinates | 41015..41284 (-) | Length | 90 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O76_RS23795 (37001) | 37001..37135 | - | 135 | WP_249531455.1 | hypothetical protein | - |
| N5O76_RS23800 (37095) | 37095..38036 | - | 942 | WP_001312841.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| N5O76_RS23805 (38217) | 38217..38517 | + | 301 | Protein_29 | hypothetical protein | - |
| N5O76_RS23810 (38595) | 38595..38942 | - | 348 | WP_000142437.1 | DUF6404 family protein | - |
| N5O76_RS23815 (39244) | 39244..39726 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| N5O76_RS23820 (39843) | 39843..40691 | - | 849 | WP_001058005.1 | 3'-5' exonuclease | - |
| N5O76_RS23825 (40737) | 40737..41015 | - | 279 | WP_097309154.1 | type II toxin-antitoxin system toxin YacB | Toxin |
| N5O76_RS23830 (41015) | 41015..41284 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin |
| N5O76_RS23835 (41806) | 41806..43034 | + | 1229 | WP_112030635.1 | IS3-like element IS2 family transposase | - |
| N5O76_RS23840 (43264) | 43264..44504 | + | 1241 | Protein_36 | HlyD family secretion protein | - |
| N5O76_RS23845 (44611) | 44611..44883 | + | 273 | Protein_37 | cysteine peptidase family C39 domain-containing protein | - |
| N5O76_RS23850 (45064) | 45064..46050 | + | 987 | Protein_38 | IS4-like element IS421 family transposase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Conjugative plasmid | sitABCD | iroB / iroC / iroD / iroE / iroN / vat / iutA / iucD / iucC / iucB / iucA | 1..182456 | 182456 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|