MGE detailed information
MGE type: Integron MGE length: 70800 bp
Accession: NZ_CP046838 Location: 781069..851868 Organism: Vibrio cholerae strain 2011EL-1271 Replicon: chromosome
Accession: NZ_CP046838 Location: 781069..851868 Organism: Vibrio cholerae strain 2011EL-1271 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY01_RS03370 () | 777295..780081 | - | 2787 | WP_032471592.1 | alkaline phosphatase family protein | - |
| GPY01_RS03380 () | 781659..782156 | - | 498 | WP_032471926.1 | hypothetical protein | - |
| GPY01_RS03385 () | 782824..782988 | - | 165 | WP_123161798.1 | DUF645 family protein | - |
| GPY01_RS03390 () | 783311..783739 | - | 429 | WP_000074666.1 | hypothetical protein | - |
| GPY01_RS03395 () | 783723..784655 | - | 933 | WP_123161834.1 | hypothetical protein | - |
| GPY01_RS03400 () | 784924..785703 | - | 780 | WP_000873382.1 | alpha/beta hydrolase | - |
| GPY01_RS03405 () | 785845..786423 | - | 579 | WP_000461673.1 | DUF2726 domain-containing protein | - |
| GPY01_RS03410 () | 786699..786977 | - | 279 | WP_032471925.1 | DUF3709 domain-containing protein | - |
| GPY01_RS03415 () | 786962..787147 | - | 186 | Protein_664 | hypothetical protein | - |
| GPY01_RS03420 () | 787204..787407 | - | 204 | WP_001933740.1 | hypothetical protein | - |
| GPY01_RS03430 () | 787745..787975 | + | 231 | WP_000838533.1 | PAS factor family protein | - |
| GPY01_RS03435 () | 788171..788671 | - | 501 | WP_032471962.1 | hypothetical protein | - |
| GPY01_RS18740 () | 788869..788907 | - | 39 | WP_139151257.1 | hypothetical protein | - |
| GPY01_RS03440 () | 788914..789051 | - | 138 | WP_002022145.1 | DUF645 family protein | - |
| GPY01_RS03445 () | 789346..789735 | - | 390 | WP_001081302.1 | hypothetical protein | - |
| GPY01_RS03460 () | 790678..790965 | - | 288 | WP_000869988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY01_RS03465 () | 790962..791243 | - | 282 | WP_032471913.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPY01_RS03470 () | 791444..791941 | - | 498 | WP_000259916.1 | GNAT family N-acetyltransferase | - |
| GPY01_RS03475 () | 792097..792432 | - | 336 | WP_032471914.1 | hypothetical protein | - |
| GPY01_RS03480 () | 792584..792778 | - | 195 | Protein_675 | hypothetical protein | - |
| GPY01_RS03485 () | 792801..793928 | - | 1128 | WP_032470627.1 | ISAs1 family transposase | - |
| GPY01_RS03495 () | 794857..795984 | - | 1128 | WP_032470627.1 | ISAs1 family transposase | - |
| GPY01_RS03500 () | 796152..796235 | - | 84 | Protein_678 | GNAT family N-acetyltransferase | - |
| GPY01_RS03505 () | 796392..796679 | - | 288 | WP_000869988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY01_RS03510 () | 796676..796957 | - | 282 | WP_032471913.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPY01_RS03515 () | 797290..797523 | - | 234 | WP_080033909.1 | DUF3709 domain-containing protein | - |
| GPY01_RS03520 () | 797544..797714 | - | 171 | Protein_682 | hypothetical protein | - |
| GPY01_RS03525 () | 797720..797995 | - | 276 | Protein_683 | ISAs1 family transposase | - |
| GPY01_RS03530 () | 798018..799144 | - | 1127 | Protein_684 | ISAs1 family transposase | - |
| GPY01_RS03535 () | 799355..799477 | - | 123 | Protein_685 | DUF645 family protein | - |
| GPY01_RS03540 () | 799833..800014 | - | 182 | Protein_686 | DUF645 family protein | - |
| GPY01_RS03545 () | 800200..800322 | - | 123 | Protein_687 | DUF3265 domain-containing protein | - |
| GPY01_RS03550 () | 800793..801038 | + | 246 | WP_001260801.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| GPY01_RS03555 () | 801038..801355 | + | 318 | WP_032471951.1 | CcdB family protein | - |
| GPY01_RS03565 () | 801603..801863 | - | 261 | WP_161403747.1 | DUF3709 domain-containing protein | - |
| GPY01_RS03570 () | 801833..802017 | - | 185 | Protein_691 | DUF3709 domain-containing protein | - |
| GPY01_RS03575 () | 804013..804177 | - | 165 | WP_123161798.1 | DUF645 family protein | - |
| GPY01_RS03580 () | 804364..804489 | - | 126 | WP_001973975.1 | DUF3265 domain-containing protein | - |
| GPY01_RS03585 () | 804949..805293 | - | 345 | WP_032471989.1 | hypothetical protein | - |
| GPY01_RS03590 () | 805504..805675 | - | 172 | Protein_695 | DUF645 family protein | - |
| GPY01_RS18745 () | 806039..806077 | - | 39 | WP_139151257.1 | hypothetical protein | - |
| GPY01_RS03595 () | 806084..806221 | - | 138 | WP_002022145.1 | DUF645 family protein | - |
| GPY01_RS03600 () | 806576..806821 | + | 246 | WP_001260801.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| GPY01_RS03605 () | 806821..807138 | + | 318 | WP_032471951.1 | CcdB family protein | - |
| GPY01_RS03610 () | 807255..807680 | - | 426 | WP_119567070.1 | GNAT family N-acetyltransferase | - |
| GPY01_RS03615 () | 807824..808180 | - | 357 | WP_001094969.1 | hypothetical protein | - |
| GPY01_RS03620 () | 808343..808783 | - | 441 | WP_001966102.1 | DUF1311 domain-containing protein | - |
| GPY01_RS18750 () | 808827..808937 | - | 111 | WP_080308943.1 | DUF3265 domain-containing protein | - |
| GPY01_RS03630 () | 808934..809251 | - | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| GPY01_RS03635 () | 809262..809549 | - | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY01_RS03640 () | 809843..810085 | + | 243 | WP_001107720.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| GPY01_RS03645 () | 810082..810381 | + | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY01_RS03655 () | 810498..810980 | - | 483 | WP_032471903.1 | GNAT family N-acetyltransferase | - |
| GPY01_RS03660 () | 811007..811132 | - | 126 | WP_001973975.1 | DUF3265 domain-containing protein | - |
| GPY01_RS03665 () | 811681..811923 | + | 243 | WP_000557291.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPY01_RS03670 () | 811942..812259 | + | 318 | WP_001180238.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY01_RS03675 () | 812395..812709 | - | 315 | WP_000071011.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| GPY01_RS03680 () | 812696..813028 | - | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY01_RS03685 () | 813219..813515 | - | 297 | WP_001069046.1 | hypothetical protein | - |
| GPY01_RS03690 () | 813653..814078 | - | 426 | WP_119567070.1 | GNAT family N-acetyltransferase | - |
| GPY01_RS03695 () | 814213..814638 | - | 426 | WP_119567070.1 | GNAT family N-acetyltransferase | - |
| GPY01_RS03700 () | 814774..815514 | - | 741 | WP_032471918.1 | PhzF family phenazine biosynthesis protein | - |
| GPY01_RS03705 () | 815570..815680 | - | 111 | Protein_718 | DUF3265 domain-containing protein | - |
| GPY01_RS03710 () | 815677..816036 | - | 360 | WP_001071517.1 | VOC family protein | - |
| GPY01_RS03715 () | 816277..816426 | - | 150 | WP_050498152.1 | DUF645 family protein | - |
| GPY01_RS03720 () | 816723..817496 | - | 774 | WP_032471917.1 | aminoglycoside phosphotransferase family protein | - |
| GPY01_RS03725 () | 817695..817874 | - | 180 | WP_080285482.1 | DUF645 family protein | - |
| GPY01_RS03730 () | 818171..818596 | - | 426 | WP_119567070.1 | GNAT family N-acetyltransferase | - |
| GPY01_RS03735 () | 818792..818974 | - | 183 | WP_001933122.1 | DUF645 family protein | - |
| GPY01_RS03740 () | 819268..819612 | - | 345 | WP_032471989.1 | hypothetical protein | - |
| GPY01_RS03745 () | 819732..820229 | - | 498 | WP_032471926.1 | hypothetical protein | - |
| GPY01_RS03750 () | 820391..821086 | - | 696 | WP_032471927.1 | hypothetical protein | - |
| GPY01_RS03755 () | 821094..821705 | - | 612 | WP_032471928.1 | DUF4433 domain-containing protein | - |
| GPY01_RS03760 () | 821886..822113 | - | 228 | WP_123161804.1 | cysteine-rich CWC family protein | - |
| GPY01_RS03770 () | 822548..822706 | - | 159 | Protein_730 | VOC family protein | - |
| GPY01_RS03775 () | 822733..823860 | - | 1128 | WP_032470627.1 | ISAs1 family transposase | - |
| GPY01_RS03780 () | 824028..824111 | - | 84 | Protein_732 | GNAT family N-acetyltransferase | - |
| GPY01_RS03785 () | 824268..824555 | - | 288 | WP_000869988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY01_RS03790 () | 824552..824833 | - | 282 | WP_032471913.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPY01_RS03795 () | 825166..825399 | - | 234 | WP_080033909.1 | DUF3709 domain-containing protein | - |
| GPY01_RS03800 () | 825420..825590 | - | 171 | Protein_736 | hypothetical protein | - |
| GPY01_RS03805 () | 825596..825871 | - | 276 | Protein_737 | ISAs1 family transposase | - |
| GPY01_RS03810 () | 825894..827020 | - | 1127 | Protein_738 | ISAs1 family transposase | - |
| GPY01_RS03815 () | 827363..827647 | + | 285 | WP_000381186.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| GPY01_RS03820 () | 827644..827922 | + | 279 | WP_000578473.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| GPY01_RS03825 () | 828121..828300 | - | 180 | Protein_741 | DUF645 family protein | - |
| GPY01_RS03830 () | 828597..829125 | - | 529 | Protein_742 | GNAT family N-acetyltransferase | - |
| GPY01_RS03835 () | 829227..829712 | - | 486 | WP_123161806.1 | hypothetical protein | - |
| GPY01_RS03840 () | 829857..830234 | - | 378 | WP_123161807.1 | hypothetical protein | - |
| GPY01_RS03845 () | 830390..830968 | - | 579 | WP_000461673.1 | DUF2726 domain-containing protein | - |
| GPY01_RS03850 () | 831225..832211 | + | 987 | WP_001170900.1 | sulfate ABC transporter substrate-binding protein | - |
| GPY01_RS03855 () | 832392..832832 | - | 441 | WP_001966102.1 | DUF1311 domain-containing protein | - |
| GPY01_RS03860 () | 833118..833354 | - | 237 | WP_032481679.1 | DUF3709 domain-containing protein | - |
| GPY01_RS03865 () | 833514..833657 | - | 144 | WP_075042602.1 | DUF3265 domain-containing protein | - |
| GPY01_RS03870 () | 833627..834028 | - | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| GPY01_RS03875 () | 834028..834198 | - | 171 | WP_001080654.1 | hypothetical protein | Antitoxin Detail |
| GPY01_RS03880 () | 834386..834730 | - | 345 | WP_032471989.1 | hypothetical protein | - |
| GPY01_RS03885 () | 834892..835392 | - | 501 | WP_032471962.1 | hypothetical protein | - |
| GPY01_RS03890 () | 835538..836053 | - | 516 | WP_057645600.1 | lipocalin family protein | - |
| GPY01_RS03895 () | 836080..836169 | - | 90 | WP_072615218.1 | DUF3265 domain-containing protein | - |
| GPY01_RS03900 () | 836187..836798 | - | 612 | WP_054104030.1 | hypothetical protein | - |
| GPY01_RS03905 () | 837016..837246 | + | 231 | WP_000838533.1 | PAS factor family protein | - |
| GPY01_RS03910 () | 837436..838260 | - | 825 | WP_080281735.1 | HNH endonuclease | - |
| GPY01_RS03915 () | 838233..838322 | - | 90 | WP_123161809.1 | acetyltransferase | - |
| GPY01_RS03920 () | 838379..838756 | - | 378 | WP_123161810.1 | hypothetical protein | - |
| GPY01_RS03925 () | 839122..840411 | + | 1290 | WP_001250791.1 | hypothetical protein | - |
| GPY01_RS03930 () | 840418..840768 | + | 351 | WP_001086649.1 | hypothetical protein | - |
| GPY01_RS03935 () | 840943..841398 | - | 456 | WP_001245329.1 | GNAT family N-acetyltransferase | - |
| GPY01_RS03940 () | 841577..841748 | - | 172 | Protein_764 | DUF645 family protein | - |
| GPY01_RS03945 () | 842110..842310 | - | 201 | Protein_765 | DUF645 family protein | - |
| GPY01_RS03950 () | 842668..842898 | + | 231 | WP_000838533.1 | PAS factor family protein | - |
| GPY01_RS03955 () | 843108..843536 | - | 429 | WP_000074666.1 | hypothetical protein | - |
| GPY01_RS03960 () | 843520..844452 | - | 933 | WP_123161834.1 | hypothetical protein | - |
| GPY01_RS03965 () | 844854..845132 | - | 279 | WP_032471925.1 | DUF3709 domain-containing protein | - |
| GPY01_RS03970 () | 845360..845938 | - | 579 | WP_000461673.1 | DUF2726 domain-containing protein | - |
| GPY01_RS03975 () | 845914..846024 | - | 111 | WP_123161811.1 | acetyltransferase | - |
| GPY01_RS03980 () | 846081..846284 | - | 204 | WP_001933740.1 | hypothetical protein | - |
| GPY01_RS03995 () | 847320..848099 | - | 780 | WP_000873382.1 | alpha/beta hydrolase | - |
| GPY01_RS04000 () | 848257..848553 | - | 297 | WP_069217115.1 | Dabb family protein | - |
| GPY01_RS04005 () | 848691..849824 | - | 1134 | WP_158142144.1 | NgoFVII family restriction endonuclease | - |
| GPY01_RS04010 () | 849862..849954 | - | 93 | WP_199250705.1 | DUF3265 domain-containing protein | - |
| GPY01_RS04015 () | 849969..850583 | - | 615 | WP_078511363.1 | hypothetical protein | - |
| GPY01_RS04020 () | 850576..851709 | - | 1134 | WP_123161813.1 | ATP-binding protein | - |
| GPY01_RS04025 () | 851995..852228 | - | 234 | WP_088129420.1 | DUF3709 domain-containing protein | - |
| GPY01_RS04030 () | 852249..852374 | - | 126 | Protein_780 | DUF3709 domain-containing protein | - |
| GPY01_RS04035 () | 852609..853124 | + | 516 | Protein_781 | integron integrase IntIA | - |
| GPY01_RS04040 () | 853355..854887 | + | 1533 | WP_123161430.1 | IS21 family transposase | - |
| GPY01_RS04045 () | 854898..855638 | + | 741 | WP_123161431.1 | IS21-like element ISVch3 family helper ATPase IstB | - |
| GPY01_RS04050 () | 855715..856170 | + | 456 | Protein_784 | integron integrase IntIA | - |
| GPY01_RS04055 () | 856252..856605 | - | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| GPY01_RS04060 () | 856647..856841 | - | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|