MGE detailed information
MGE type: Integron MGE length: 90063 bp
Accession: NZ_CP043556 Location: 981561..1071623 Organism: Vibrio cholerae strain RFB16 Replicon: chromosome
Accession: NZ_CP043556 Location: 981561..1071623 Organism: Vibrio cholerae strain RFB16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F0316_RS18585 () | 976841..977206 | - | 366 | WP_000969534.1 | hypothetical protein | - |
| F0316_RS18590 () | 977349..977984 | - | 636 | WP_095474051.1 | hypothetical protein | - |
| F0316_RS18595 () | 978266..978493 | - | 228 | WP_172626103.1 | DUF3709 domain-containing protein | - |
| F0316_RS18605 () | 978604..979407 | - | 804 | WP_149560819.1 | hypothetical protein | - |
| F0316_RS18610 () | 979646..979888 | + | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| F0316_RS18615 () | 979907..980227 | + | 321 | WP_172626086.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| F0316_RS18620 () | 980341..981381 | - | 1041 | WP_057569038.1 | IS481 family transposase | - |
| F0316_RS18625 () | 981561..982025 | - | 465 | WP_057563740.1 | hypothetical protein | - |
| F0316_RS19915 () | 982586..982696 | + | 111 | Protein_858 | DUF645 family protein | - |
| F0316_RS18640 () | 983025..983246 | + | 222 | WP_033839066.1 | DUF3709 domain-containing protein | - |
| F0316_RS18650 () | 983542..983928 | + | 387 | WP_000703159.1 | VOC family protein | - |
| F0316_RS18655 () | 984066..984566 | + | 501 | WP_000686370.1 | NAD(P)H-dependent oxidoreductase | - |
| F0316_RS18665 () | 984754..985353 | + | 600 | WP_119567062.1 | hypothetical protein | - |
| F0316_RS18670 () | 985373..985942 | + | 570 | WP_149560821.1 | hypothetical protein | - |
| F0316_RS18680 () | 986164..986427 | + | 264 | WP_149560822.1 | hypothetical protein | - |
| F0316_RS18690 () | 986594..987355 | + | 762 | WP_069730946.1 | hypothetical protein | - |
| F0316_RS18695 () | 987607..987843 | + | 237 | WP_162797183.1 | DUF645 family protein | - |
| F0316_RS18700 () | 988056..988478 | + | 423 | WP_149560823.1 | hypothetical protein | - |
| F0316_RS18710 () | 988659..988943 | + | 285 | WP_000048762.1 | antibiotic biosynthesis monooxygenase | - |
| F0316_RS18715 () | 989081..989515 | + | 435 | WP_149560825.1 | GNAT family N-acetyltransferase | - |
| F0316_RS18720 () | 989669..990286 | + | 618 | WP_054103946.1 | hypothetical protein | - |
| F0316_RS18725 () | 990433..991071 | + | 639 | WP_149560826.1 | HD domain-containing protein | - |
| F0316_RS18730 () | 991364..991544 | + | 181 | Protein_872 | DUF645 family protein | - |
| F0316_RS18740 () | 992054..992179 | + | 126 | WP_021822797.1 | DUF3265 domain-containing protein | - |
| F0316_RS19920 () | 992312..992455 | + | 144 | Protein_874 | DUF645 family protein | - |
| F0316_RS19925 () | 992509..992547 | + | 39 | WP_082798268.1 | hypothetical protein | - |
| F0316_RS18755 () | 992767..993567 | + | 801 | WP_080389385.1 | PhzF family phenazine biosynthesis protein | - |
| F0316_RS18770 () | 993710..994243 | + | 534 | WP_000679873.1 | GNAT family N-acetyltransferase | - |
| F0316_RS18775 () | 994379..994894 | + | 516 | WP_114717184.1 | hypothetical protein | - |
| F0316_RS18780 () | 994876..995001 | + | 126 | WP_114717185.1 | DUF3265 domain-containing protein | - |
| F0316_RS18790 () | 995122..995547 | + | 426 | WP_033930536.1 | hypothetical protein | - |
| F0316_RS18795 () | 995651..996349 | + | 699 | WP_052259841.1 | HAD family phosphatase | - |
| F0316_RS18800 () | 996493..996981 | + | 489 | WP_000424240.1 | hypothetical protein | - |
| F0316_RS19930 () | 997127..997765 | + | 639 | WP_172626087.1 | hypothetical protein | - |
| F0316_RS18805 () | 997901..998269 | + | 369 | WP_057558163.1 | hypothetical protein | - |
| F0316_RS18810 () | 998403..998918 | + | 516 | WP_000343786.1 | dTDP-fucosamine acetyltransferase | VF |
| F0316_RS19935 () | 999066..999170 | + | 105 | WP_172626088.1 | DUF3709 domain-containing protein | - |
| F0316_RS18820 () | 999191..999424 | + | 234 | WP_057562222.1 | DUF3709 domain-containing protein | - |
| F0316_RS18825 () | 999705..1000274 | + | 570 | WP_000686204.1 | flavodoxin family protein | - |
| F0316_RS18830 () | 1000409..1000960 | + | 552 | WP_000672156.1 | hypothetical protein | - |
| F0316_RS18835 () | 1001108..1001605 | - | 498 | WP_149560828.1 | GNAT family N-acetyltransferase | Toxin Detail |
| F0316_RS18840 () | 1001602..1001874 | - | 273 | WP_000246254.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| F0316_RS18855 () | 1002795..1002974 | + | 180 | WP_002021999.1 | DUF645 family protein | - |
| F0316_RS18860 () | 1003174..1004040 | + | 867 | WP_149560829.1 | hypothetical protein | - |
| F0316_RS18870 () | 1004650..1005165 | + | 516 | WP_001201533.1 | lipocalin family protein | - |
| F0316_RS18875 () | 1005323..1005859 | + | 537 | WP_000469482.1 | GNAT family N-acetyltransferase | - |
| F0316_RS18880 () | 1006000..1006578 | + | 579 | WP_000395682.1 | O-methyltransferase | - |
| F0316_RS18885 () | 1006719..1007144 | + | 426 | WP_002045007.1 | GNAT family N-acetyltransferase | - |
| F0316_RS18890 () | 1007201..1007308 | + | 108 | WP_149560830.1 | acetyltransferase | - |
| F0316_RS18900 () | 1007734..1008333 | + | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| F0316_RS18910 () | 1008481..1008867 | + | 387 | WP_000703159.1 | VOC family protein | - |
| F0316_RS18920 () | 1009164..1009343 | + | 180 | WP_171008950.1 | DUF645 family protein | - |
| F0316_RS18925 () | 1009537..1010070 | + | 534 | WP_000210269.1 | hypothetical protein | - |
| F0316_RS18930 () | 1010127..1010249 | + | 123 | WP_149560832.1 | acetyltransferase | - |
| F0316_RS18935 () | 1010246..1010722 | + | 477 | WP_148555385.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| F0316_RS18940 () | 1011046..1011222 | + | 177 | WP_081017942.1 | DUF645 family protein | - |
| F0316_RS18945 () | 1011575..1011757 | + | 183 | WP_149560877.1 | DUF645 family protein | - |
| F0316_RS19940 () | 1011959..1012798 | + | 840 | WP_142993905.1 | hypothetical protein | - |
| F0316_RS18950 () | 1013158..1013253 | + | 96 | WP_001907607.1 | DUF645 family protein | - |
| F0316_RS18955 () | 1013459..1013998 | + | 540 | WP_000884561.1 | hydrolase | - |
| F0316_RS18960 () | 1014235..1014831 | + | 597 | WP_149560833.1 | hypothetical protein | - |
| F0316_RS18965 () | 1015154..1015333 | + | 180 | WP_001898535.1 | DUF645 family protein | - |
| F0316_RS18970 () | 1015547..1015942 | + | 396 | WP_044128232.1 | DUF3465 domain-containing protein | - |
| F0316_RS18975 () | 1016117..1016530 | + | 414 | WP_172626089.1 | hypothetical protein | - |
| F0316_RS18980 () | 1016691..1016945 | + | 255 | WP_149560835.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| F0316_RS18985 () | 1016938..1017201 | + | 264 | WP_000098716.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| F0316_RS18995 () | 1017516..1017698 | + | 183 | Protein_916 | DUF645 family protein | - |
| F0316_RS19000 () | 1018056..1018235 | + | 180 | WP_001898535.1 | DUF645 family protein | - |
| F0316_RS19005 () | 1018440..1018664 | + | 225 | WP_162797377.1 | hypothetical protein | - |
| F0316_RS19010 () | 1018936..1019343 | + | 408 | WP_061058663.1 | NUDIX hydrolase | - |
| F0316_RS19015 () | 1019533..1019883 | - | 351 | WP_076008713.1 | hypothetical protein | - |
| F0316_RS19020 () | 1019890..1021173 | - | 1284 | WP_114725992.1 | hypothetical protein | - |
| F0316_RS19030 () | 1021697..1021879 | + | 183 | WP_000947517.1 | DUF645 family protein | - |
| F0316_RS19040 () | 1022074..1022574 | + | 501 | WP_149560836.1 | hypothetical protein | - |
| F0316_RS19045 () | 1022614..1023534 | - | 921 | WP_149560805.1 | IS5 family transposase ISVch8 | Transposase |
| F0316_RS19050 () | 1023808..1024233 | + | 426 | WP_000620001.1 | putative N-acetyltransferase YjaB | VF |
| F0316_RS19055 () | 1025188..1025535 | + | 348 | WP_000933409.1 | hypothetical protein | - |
| F0316_RS19060 () | 1025831..1026010 | + | 180 | WP_149560837.1 | DUF645 family protein | - |
| F0316_RS19070 () | 1026268..1026678 | + | 411 | WP_149560879.1 | dual specificity protein phosphatase family protein | - |
| F0316_RS19075 () | 1026915..1027832 | + | 918 | WP_172626104.1 | DUF2971 domain-containing protein | - |
| F0316_RS19080 () | 1028089..1028487 | + | 399 | WP_021706447.1 | VOC family protein | - |
| F0316_RS19090 () | 1028715..1029002 | + | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F0316_RS19095 () | 1029013..1029330 | + | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| F0316_RS19105 () | 1029623..1029804 | + | 182 | Protein_933 | DUF645 family protein | - |
| F0316_RS19115 () | 1030002..1030427 | + | 426 | WP_149560839.1 | hypothetical protein | - |
| F0316_RS19120 () | 1030527..1030775 | + | 249 | Protein_935 | DUF3709 domain-containing protein | - |
| F0316_RS19125 () | 1031045..1031521 | + | 477 | WP_001047183.1 | GNAT family N-acetyltransferase | - |
| F0316_RS19135 () | 1031640..1032155 | + | 516 | WP_000090010.1 | hypothetical protein | - |
| F0316_RS19140 () | 1032293..1032637 | + | 345 | Protein_938 | hypothetical protein | - |
| F0316_RS19145 () | 1032697..1033737 | - | 1041 | WP_057569038.1 | IS481 family transposase ISVvu4 | Transposase |
| F0316_RS19150 () | 1034109..1034387 | - | 279 | WP_000578471.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| F0316_RS19155 () | 1034384..1034668 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| F0316_RS19160 () | 1035181..1035306 | + | 126 | Protein_942 | DUF3265 domain-containing protein | - |
| F0316_RS19165 () | 1035540..1035674 | + | 135 | WP_080299877.1 | DUF645 family protein | - |
| F0316_RS19175 () | 1035893..1036306 | + | 414 | WP_149560841.1 | GNAT family N-acetyltransferase | - |
| F0316_RS19180 () | 1036466..1037044 | + | 579 | WP_149560842.1 | O-methyltransferase | - |
| F0316_RS19185 () | 1037196..1037897 | + | 702 | WP_001175917.1 | hypothetical protein | - |
| F0316_RS19190 () | 1038092..1038982 | + | 891 | WP_114721400.1 | bacteriophage abortive infection AbiH family protein | - |
| F0316_RS19195 () | 1039103..1039765 | + | 663 | WP_094166355.1 | Streptogramin A acetyltransferase | VF |
| F0316_RS19210 () | 1040273..1040758 | + | 486 | WP_149560844.1 | GNAT family N-acetyltransferase | - |
| F0316_RS19215 () | 1040755..1040871 | + | 117 | WP_149560845.1 | DUF3265 domain-containing protein | - |
| F0316_RS19220 () | 1040910..1041479 | + | 570 | WP_084980905.1 | flavodoxin family protein | - |
| F0316_RS19230 () | 1041618..1042052 | + | 435 | WP_000453958.1 | GNAT family N-acetyltransferase | - |
| F0316_RS19240 () | 1042268..1043185 | + | 918 | WP_142735514.1 | alpha/beta hydrolase | - |
| F0316_RS19245 () | 1043248..1043331 | + | 84 | WP_149560880.1 | acetyltransferase | - |
| F0316_RS19250 () | 1043338..1043934 | + | 597 | WP_084981911.1 | class I SAM-dependent methyltransferase | - |
| F0316_RS19255 () | 1043904..1044041 | + | 138 | WP_094182966.1 | DUF3265 domain-containing protein | - |
| F0316_RS19260 () | 1044400..1044522 | + | 123 | WP_130249766.1 | DUF3265 domain-containing protein | - |
| F0316_RS19265 () | 1044696..1044878 | + | 183 | WP_088132376.1 | DUF645 family protein | - |
| F0316_RS19270 () | 1045269..1045598 | + | 330 | WP_080281738.1 | GNAT family N-acetyltransferase | - |
| F0316_RS19275 () | 1045893..1046075 | + | 183 | WP_000947517.1 | DUF645 family protein | - |
| F0316_RS19285 () | 1046277..1046765 | + | 489 | WP_000424240.1 | hypothetical protein | - |
| F0316_RS19290 () | 1046965..1047246 | + | 282 | WP_000086649.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| F0316_RS19295 () | 1047243..1047530 | + | 288 | WP_000869995.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F0316_RS19300 () | 1047680..1048258 | + | 579 | WP_172626090.1 | DJ-1/PfpI family protein | - |
| F0316_RS19305 () | 1048454..1048720 | + | 267 | WP_088132343.1 | TIGR03643 family protein | - |
| F0316_RS19315 () | 1048838..1049155 | - | 318 | WP_000077449.1 | CcdB family protein | - |
| F0316_RS19320 () | 1049155..1049400 | - | 246 | WP_001260801.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| F0316_RS19325 () | 1049620..1050033 | + | 414 | WP_149560848.1 | GNAT family N-acetyltransferase | - |
| F0316_RS19330 () | 1050213..1050638 | + | 426 | WP_000620001.1 | putative N-acetyltransferase YjaB | VF |
| F0316_RS19340 () | 1050960..1051112 | + | 153 | WP_080285828.1 | DUF645 family protein | - |
| F0316_RS19345 () | 1051364..1051621 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| F0316_RS19350 () | 1051609..1051911 | + | 303 | WP_000807826.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F0316_RS19355 () | 1052078..1052545 | + | 468 | WP_065818801.1 | hypothetical protein | - |
| F0316_RS19360 () | 1052688..1052984 | + | 297 | WP_148520498.1 | Dabb family protein | - |
| F0316_RS19365 () | 1053129..1053419 | - | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F0316_RS19370 () | 1053409..1053657 | - | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| F0316_RS19375 () | 1053852..1054451 | + | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| F0316_RS19380 () | 1054669..1054953 | + | 285 | WP_149560850.1 | nuclear transport factor 2 family protein | - |
| F0316_RS19390 () | 1055166..1055579 | + | 414 | WP_148523205.1 | VOC family protein | - |
| F0316_RS19400 () | 1055728..1056120 | + | 393 | WP_001085000.1 | nuclear transport factor 2 family protein | - |
| F0316_RS19405 () | 1056256..1056792 | + | 537 | WP_019829641.1 | nucleotidyltransferase family protein | - |
| F0316_RS19410 () | 1056933..1057721 | + | 789 | WP_142578780.1 | DUF2971 domain-containing protein | - |
| F0316_RS19415 () | 1057870..1058402 | + | 533 | Protein_983 | hypothetical protein | - |
| F0316_RS19420 () | 1058597..1059517 | - | 921 | WP_149560805.1 | IS5 family transposase ISVch8 | Transposase |
| F0316_RS19425 () | 1059561..1060217 | + | 657 | WP_149560852.1 | LysE family translocator | - |
| F0316_RS19430 () | 1060365..1061168 | + | 804 | WP_149560853.1 | class I SAM-dependent methyltransferase | - |
| F0316_RS19435 () | 1061321..1061809 | + | 489 | WP_149560854.1 | hypothetical protein | - |
| F0316_RS19440 () | 1061928..1062209 | + | 282 | WP_080368113.1 | DUF1289 domain-containing protein | - |
| F0316_RS19455 () | 1062408..1062594 | + | 187 | Protein_989 | DUF3709 domain-containing protein | - |
| F0316_RS19460 () | 1062591..1062824 | + | 234 | WP_148520751.1 | DUF3709 domain-containing protein | - |
| F0316_RS19470 () | 1063089..1063406 | - | 318 | WP_172626091.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F0316_RS19475 () | 1063425..1063667 | - | 243 | WP_000557291.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| F0316_RS19480 () | 1063911..1064258 | + | 348 | WP_000933409.1 | hypothetical protein | - |
| F0316_RS19485 () | 1064547..1065671 | + | 1125 | WP_095474076.1 | right-handed parallel beta-helix repeat-containing protein | - |
| F0316_RS19490 () | 1065827..1066264 | + | 438 | WP_000503164.1 | IS200-IS605 family transposase IS1004 | Transposase |
| F0316_RS19495 () | 1066548..1067030 | + | 483 | WP_149560857.1 | GNAT family N-acetyltransferase | - |
| F0316_RS19500 () | 1067171..1067557 | + | 387 | WP_001015087.1 | MmcQ/YjbR family DNA-binding protein | - |
| F0316_RS19505 () | 1067694..1067816 | - | 123 | Protein_998 | type II toxin-antitoxin system YafQ family toxin | - |
| F0316_RS19515 () | 1068959..1069375 | + | 417 | WP_000759006.1 | DUF1311 domain-containing protein | - |
| F0316_RS19520 () | 1069530..1070306 | + | 777 | WP_149560858.1 | choline kinase | - |
| F0316_RS19525 () | 1070391..1070909 | + | 519 | WP_149560882.1 | hypothetical protein | - |
| F0316_RS19530 () | 1070900..1071022 | + | 123 | WP_080368119.1 | DUF3265 domain-containing protein | - |
| F0316_RS19535 () | 1071120..1071623 | + | 504 | WP_149560859.1 | hypothetical protein | - |
| F0316_RS19545 () | 1072146..1074932 | + | 2787 | WP_001131708.1 | alkaline phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|