MGE detailed information
MGE type: Integron MGE length: 57833 bp
Accession: NZ_CP016988 Location: 402484..460316 Organism: Vibrio cholerae strain FORC_055 isolate MFDS Replicon: chromosome
Accession: NZ_CP016988 Location: 402484..460316 Organism: Vibrio cholerae strain FORC_055 isolate MFDS Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC55_RS16290 () | 397597..397917 | + | 321 | WP_096070608.1 | IS66 family insertion sequence hypothetical protein | - |
| FORC55_RS16295 () | 397914..398267 | + | 354 | WP_096070609.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| FORC55_RS16300 () | 398327..399859 | + | 1533 | WP_096070610.1 | IS66 family transposase | - |
| FORC55_RS16305 () | 399891..401000 | - | 1110 | Protein_354 | IS66 family transposase | - |
| FORC55_RS16310 () | 401060..401413 | - | 354 | WP_096070609.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| FORC55_RS16315 () | 401410..401730 | - | 321 | WP_096070608.1 | IS66 family insertion sequence hypothetical protein | - |
| FORC55_RS16320 () | 402159..402500 | + | 342 | WP_002021949.1 | hypothetical protein | - |
| FORC55_RS16325 () | 402484..402912 | + | 429 | WP_000074666.1 | hypothetical protein | - |
| FORC55_RS16330 () | 403076..403627 | + | 552 | WP_000672156.1 | hypothetical protein | - |
| FORC55_RS16335 () | 403768..404085 | - | 318 | WP_001180238.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FORC55_RS16340 () | 404104..404346 | - | 243 | WP_000557291.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FORC55_RS16345 () | 404683..405771 | + | 1089 | WP_096070909.1 | PAAR domain-containing protein | - |
| FORC55_RS16350 () | 405771..406172 | + | 402 | WP_032475969.1 | hypothetical protein | - |
| FORC55_RS16355 () | 406503..406655 | + | 153 | WP_032469020.1 | DUF645 family protein | - |
| FORC55_RS19880 () | 406806..406938 | + | 133 | Protein_365 | general secretion pathway protein GspI | - |
| FORC55_RS16365 () | 407013..407195 | + | 183 | WP_001966054.1 | DUF645 family protein | - |
| FORC55_RS16375 () | 407409..408413 | + | 1005 | WP_000964935.1 | LD-carboxypeptidase | - |
| FORC55_RS16380 () | 408555..409052 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| FORC55_RS16385 () | 409049..409321 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| FORC55_RS16395 () | 409557..409943 | + | 387 | WP_001015079.1 | MmcQ/YjbR family DNA-binding protein | - |
| FORC55_RS16405 () | 410181..410420 | + | 240 | WP_000935785.1 | DUF645 family protein | - |
| FORC55_RS16410 () | 410620..411117 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| FORC55_RS16415 () | 411114..411386 | - | 273 | WP_000246252.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| FORC55_RS16425 () | 411620..412171 | + | 552 | WP_001008563.1 | VRR-NUC domain-containing protein | - |
| FORC55_RS16435 () | 412699..413199 | + | 501 | WP_096070910.1 | hypothetical protein | - |
| FORC55_RS16440 () | 413381..414730 | + | 1350 | WP_001249388.1 | trypsin-like serine protease | - |
| FORC55_RS19745 () | 414818..415003 | + | 186 | WP_145995864.1 | DUF3709 domain-containing protein | - |
| FORC55_RS16445 () | 415024..415257 | + | 234 | WP_002033284.1 | DUF3709 domain-containing protein | - |
| FORC55_RS16450 () | 415661..415894 | + | 234 | WP_032475975.1 | DUF3709 domain-containing protein | - |
| FORC55_RS19750 () | 416083..416277 | + | 195 | WP_080286596.1 | DUF3709 domain-containing protein | - |
| FORC55_RS16455 () | 416298..416531 | + | 234 | WP_002033284.1 | DUF3709 domain-containing protein | - |
| FORC55_RS16465 () | 417276..417773 | + | 498 | WP_000259910.1 | GNAT family N-acetyltransferase | - |
| FORC55_RS16470 () | 417894..418814 | + | 921 | WP_004393974.1 | IS5 family transposase ISVpa3 | Transposase |
| FORC55_RS16475 () | 418956..419252 | + | 297 | WP_001069046.1 | hypothetical protein | - |
| FORC55_RS16480 () | 419443..419775 | + | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FORC55_RS16485 () | 419762..420076 | + | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| FORC55_RS16490 () | 420204..420494 | - | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FORC55_RS16495 () | 420484..420732 | - | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FORC55_RS16500 () | 420935..421453 | + | 519 | WP_000698780.1 | GNAT family N-acetyltransferase | - |
| FORC55_RS16505 () | 422093..422380 | + | 288 | WP_032475967.1 | hypothetical protein | - |
| FORC55_RS16510 () | 422677..422841 | + | 165 | WP_001902694.1 | DUF645 family protein | - |
| FORC55_RS16520 () | 423059..423547 | + | 489 | WP_000424241.1 | hypothetical protein | - |
| FORC55_RS16525 () | 423684..424166 | + | 483 | WP_032481646.1 | GNAT family N-acetyltransferase | - |
| FORC55_RS16535 () | 424366..424713 | + | 348 | WP_000885701.1 | DUF3024 domain-containing protein | - |
| FORC55_RS16540 () | 424885..425324 | + | 440 | Protein_395 | DUF1311 domain-containing protein | - |
| FORC55_RS16545 () | 425386..425829 | + | 444 | WP_080286576.1 | histidine kinase | - |
| FORC55_RS16550 () | 425999..426355 | + | 357 | WP_001094969.1 | hypothetical protein | - |
| FORC55_RS16555 () | 426519..426914 | + | 396 | WP_000870862.1 | DUF3465 domain-containing protein | - |
| FORC55_RS16560 () | 427069..428283 | + | 1215 | WP_001966036.1 | DUF3644 domain-containing protein | - |
| FORC55_RS16570 () | 428475..428798 | + | 324 | WP_080281225.1 | DUF3709 domain-containing protein | - |
| FORC55_RS16575 () | 429066..429992 | + | 927 | WP_000377814.1 | hypothetical protein | - |
| FORC55_RS16585 () | 430289..430468 | + | 180 | WP_002021999.1 | DUF645 family protein | - |
| FORC55_RS16595 () | 430823..431005 | + | 183 | WP_002021798.1 | DUF645 family protein | - |
| FORC55_RS16600 () | 431131..431871 | - | 741 | WP_011988345.1 | IS21 family transposase ISVch3 | Transposase |
| FORC55_RS16605 () | 431882..433414 | - | 1533 | WP_096070876.1 | IS21 family transposase ISVch3 | Transposase |
| FORC55_RS16610 () | 433817..434353 | + | 537 | WP_005526589.1 | nucleotidyltransferase family protein | - |
| FORC55_RS16615 () | 434650..434829 | + | 180 | WP_032479678.1 | DUF645 family protein | - |
| FORC55_RS16625 () | 434978..435559 | + | 582 | WP_032483186.1 | nucleotidyltransferase family protein | - |
| FORC55_RS19765 () | 435650..435834 | + | 185 | Protein_409 | DUF3709 domain-containing protein | - |
| FORC55_RS16630 () | 435831..435998 | + | 168 | WP_050553103.1 | DUF3709 domain-containing protein | - |
| FORC55_RS16635 () | 436334..436630 | + | 297 | WP_001069046.1 | hypothetical protein | - |
| FORC55_RS16640 () | 436883..437980 | + | 1098 | Protein_412 | PAAR domain-containing protein | - |
| FORC55_RS19885 () | 437980..438384 | + | 405 | WP_000915985.1 | hypothetical protein | - |
| FORC55_RS16650 () | 438541..439005 | + | 465 | WP_000392737.1 | ASCH domain-containing protein | - |
| FORC55_RS16660 () | 439260..440180 | - | 921 | WP_096070524.1 | IS5 family transposase ISVa2 | Transposase |
| FORC55_RS16665 () | 440239..441324 | + | 1086 | WP_096070914.1 | DUF4238 domain-containing protein | - |
| FORC55_RS16670 () | 441339..441431 | + | 93 | WP_075042595.1 | DUF3265 domain-containing protein | - |
| FORC55_RS16675 () | 441464..441961 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| FORC55_RS16680 () | 441958..442230 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| FORC55_RS16690 () | 442469..442966 | + | 498 | WP_000259902.1 | GNAT family N-acetyltransferase | - |
| FORC55_RS19890 () | 443023..443130 | + | 108 | WP_096070915.1 | acetyltransferase | - |
| FORC55_RS19895 () | 443723..443894 | + | 172 | Protein_422 | DUF645 family protein | - |
| FORC55_RS16715 () | 444130..444480 | - | 351 | WP_001086649.1 | hypothetical protein | - |
| FORC55_RS16720 () | 444487..445776 | - | 1290 | WP_001250791.1 | hypothetical protein | - |
| FORC55_RS16725 () | 446140..446655 | + | 516 | WP_000343786.1 | dTDP-fucosamine acetyltransferase | VF |
| FORC55_RS16730 () | 447204..447815 | - | 612 | Protein_426 | IS30 family transposase ISVa6 | Transposase |
| FORC55_RS16735 () | 447852..449384 | - | 1533 | WP_096070610.1 | IS66 family transposase ISVa11 | Transposase |
| FORC55_RS16740 () | 449444..449797 | - | 354 | WP_096070609.1 | IS66 family transposase ISVa11 | Transposase |
| FORC55_RS16745 () | 449794..450114 | - | 321 | WP_096070608.1 | IS66 family transposase ISVa11 | Transposase |
| FORC55_RS16750 () | 450204..450554 | - | 351 | Protein_430 | IS30 family transposase ISVvu6 | Transposase |
| FORC55_RS16760 () | 450947..451129 | + | 183 | WP_000947519.1 | DUF645 family protein | - |
| FORC55_RS16770 () | 451311..451973 | + | 663 | WP_001253122.1 | hypothetical protein | - |
| FORC55_RS16780 () | 452127..452486 | + | 360 | WP_001071525.1 | VOC family protein | - |
| FORC55_RS16790 () | 452790..452961 | + | 172 | Protein_434 | DUF645 family protein | - |
| FORC55_RS16800 () | 453159..453500 | + | 342 | WP_000452085.1 | hypothetical protein | - |
| FORC55_RS16810 () | 453647..454186 | + | 540 | WP_000884557.1 | hydrolase | - |
| FORC55_RS16825 () | 454731..455009 | - | 279 | WP_000578471.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| FORC55_RS16830 () | 455006..455290 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| FORC55_RS16835 () | 455494..455991 | + | 498 | WP_000259910.1 | GNAT family N-acetyltransferase | - |
| FORC55_RS16850 () | 456645..456926 | + | 282 | WP_080033233.1 | DUF1289 domain-containing protein | - |
| FORC55_RS16865 () | 457305..458237 | + | 933 | WP_001267735.1 | hypothetical protein | - |
| FORC55_RS16870 () | 458221..458649 | + | 429 | WP_000082746.1 | hypothetical protein | - |
| FORC55_RS16875 () | 458867..459124 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FORC55_RS16880 () | 459112..459414 | + | 303 | WP_000818171.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FORC55_RS16885 () | 459884..460009 | + | 126 | WP_001933211.1 | DUF3265 domain-containing protein | - |
| FORC55_RS16890 () | 460017..460316 | - | 300 | WP_001247271.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FORC55_RS16895 () | 460313..460555 | - | 243 | WP_001107716.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| FORC55_RS16900 () | 461144..463930 | + | 2787 | WP_198302791.1 | alkaline phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|