MGE detailed information
MGE type: Genomic_island MGE length: 16944 bp
Accession: NZ_CP007799 Location: 1694571..1711514 Organism: Escherichia coli Nissle 1917 Replicon: chromosome
Accession: NZ_CP007799 Location: 1694571..1711514 Organism: Escherichia coli Nissle 1917 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECOLIN_RS08585 (ECOLIN_08290) | 1691386..1693071 | - | 1686 | WP_001304373.1 | ABC transporter ATP-binding protein/permease | - |
| ECOLIN_RS31420 | 1693271..1693396 | + | 126 | WP_122083086.1 | hypothetical protein | - |
| ECOLIN_RS08590 (ECOLIN_08295) | 1693362..1694519 | - | 1158 | WP_001304372.1 | anaerobic sulfatase maturase | - |
| ECOLIN_RS08595 (ECOLIN_08300) | 1694571..1696253 | - | 1683 | WP_001296072.1 | sulfatase | - |
| ECOLIN_RS08600 (ECOLIN_08305) | 1696655..1697416 | - | 762 | WP_000060504.1 | acid stress response transcriptional regulator YdeO | - |
| ECOLIN_RS08605 (ECOLIN_08310) | 1697492..1697689 | - | 198 | WP_000543389.1 | two-component system connector SafA | - |
| ECOLIN_RS08610 (ECOLIN_08315) | 1697937..1700216 | - | 2280 | WP_000726723.1 | acid resistance putative oxidoreductase YdeP | - |
| ECOLIN_RS08615 (ECOLIN_08320) | 1700555..1701469 | - | 915 | WP_000520591.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| ECOLIN_RS08620 (ECOLIN_08325) | 1701529..1702032 | - | 504 | WP_000825467.1 | Protein FimG | VF |
| ECOLIN_RS08625 (ECOLIN_08330) | 1702045..1702575 | - | 531 | WP_000876767.1 | Protein FimF | VF |
| ECOLIN_RS08630 (ECOLIN_08335) | 1702589..1705240 | - | 2652 | WP_000123643.1 | Outer membrane usher protein FimD | VF |
| ECOLIN_RS08635 (ECOLIN_08340) | 1705282..1705992 | - | 711 | WP_001195181.1 | Chaperone protein FocC | VF |
| ECOLIN_RS08640 (ECOLIN_08345) | 1706354..1706917 | - | 564 | WP_001327671.1 | Type-1 fimbrial protein, A chain | VF |
| ECOLIN_RS08650 (ECOLIN_08355) | 1707693..1708475 | - | 783 | WP_001221834.1 | SDR family oxidoreductase | - |
| ECOLIN_RS32590 | 1708624..1709205 | + | 582 | Protein_1649 | HTH-type transcriptional regulator ArgP | VF |
| ECOLIN_RS32595 | 1709253..1709666 | + | 414 | WP_000753076.1 | HTH-type transcriptional regulator ArgP | VF |
| ECOLIN_RS08665 (ECOLIN_08365) | 1709929..1711248 | - | 1320 | WP_038427096.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| ECOLIN_RS08670 (ECOLIN_08370) | 1711248..1711514 | - | 267 | WP_001304368.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| ECOLIN_RS08675 (ECOLIN_08375) | 1711822..1712580 | + | 759 | WP_001286540.1 | trans-aconitate 2-methyltransferase | - |
| ECOLIN_RS08680 (ECOLIN_08380) | 1712584..1713498 | - | 915 | WP_001443133.1 | bestrophin family protein | - |
| ECOLIN_RS08690 (ECOLIN_08385) | 1713687..1715147 | - | 1461 | WP_000854661.1 | tagaturonate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli APEC O1 | Genomic island | TA21756 | NC_008563 | 1629378..1645495 | 0.007 | |
| Escherichia coli LF82 | Genomic island | TA23545 | NC_011993 | 1532928..1553940 | 0.01 | |
| Escherichia coli IHE3034 | Genomic island | TA27233 | NC_017628 | 1684699..1700816 | 0.007 | |
| Escherichia coli O83:H1 str. NRG 857C | Genomic island | TA27335 | NC_017634 | 1541740..1562752 | 0.01 | |
| Escherichia coli str. clone D i14 | Genomic island | TA27541 | NC_017652 | 1709932..1725878 | 0.002 | |
| Escherichia coli APEC O18 | Genomic island | TA45654 | NZ_CP006830 | 518493..534610 | 0.007 | |
| Escherichia coli strain O18 | Genomic island | TA46247 | NZ_CP007275 | 708755..724872 | 0.007 | |
| Escherichia coli strain ZJ3920 | Genomic island | TA75088 | NZ_CP020545 | 1546225..1562342 | 0.007 | |
| Escherichia coli Nissle 1917 | Genomic island | TA79524 | NZ_CP022686 | 89668..106610 | 0 | |
| Escherichia coli strain AR_0017 | Genomic island | TA89099 | NZ_CP024886 | 838931..855209 | 0.007 | |
| Escherichia coli strain ExPEC XM | Genomic island | TA90108 | NZ_CP025328 | 1671741..1689067 | 0.008 | |
| Escherichia coli strain MS7163 | Genomic island | TA96486 | NZ_CP026853 | 1617200..1632409 | 0.009 | |
| Escherichia coli O18:H1 strain CFSAN067215 | Genomic island | TA100966 | NZ_CP028320 | 2587618..2603945 | 0.001 | |
| Escherichia coli strain A3 | Genomic island | TA104070 | NZ_CP028771 | 2321288..2338231 | 0.007 | |
| Escherichia coli strain ATCC 25922 | Genomic island | TA111064 | NZ_CP032085 | 587180..604122 | 0 | |
| Escherichia coli strain FDAARGOS_536 | Genomic island | TA114268 | NZ_CP033762 | 1009059..1025386 | 0.006 | |
| Escherichia coli strain NissleGFP_pZE21 | Genomic island | TA117950 | NZ_CP035486 | 1687352..1704294 | 0 | |
| Escherichia coli strain ATCC 25922 | Genomic island | TA119973 | NZ_CP037449 | 4508280..4525221 | 0 | |
| Escherichia coli strain DE17 | Genomic island | TA141428 | NZ_CP045206 | 2345111..2361228 | 0.007 | |
| Escherichia coli CFT073 | Genomic island | TA153932 | NZ_CP051263 | 1777257..1794199 | 0 | |
| Escherichia coli strain SCU-123 | Genomic island | TA154922 | NZ_CP051711 | 225553..241670 | 0.006 | |
| Escherichia coli strain SCU-116 | Genomic island | TA155004 | NZ_CP051719 | 281328..298781 | 0.008 | |
| Escherichia coli strain PBP5 | Genomic island | TA191277 | NZ_CP069621 | 89668..106610 | 0 | |
| Escherichia coli strain PBP8 | Genomic island | TA191304 | NZ_CP069624 | 89668..106610 | 0 | |
| Escherichia coli strain ESM1.4 | Genomic island | TA191331 | NZ_CP069627 | 89668..106610 | 0 | |
| Escherichia coli strain ESM2.2 | Genomic island | TA191358 | NZ_CP069630 | 89668..106610 | 0 | |
| Escherichia coli strain SSGw1 | Genomic island | TA191385 | NZ_CP069633 | 89668..106610 | 0 | |
| Escherichia coli strain SSGw2 | Genomic island | TA191412 | NZ_CP069636 | 89668..106610 | 0 | |
| Escherichia coli strain SSGNw1 | Genomic island | TA191439 | NZ_CP069639 | 89668..106610 | 0 | |
| Escherichia coli strain SSGNw2 | Genomic island | TA191466 | NZ_CP069642 | 89668..106610 | 0 | |
| Escherichia coli strain FDAARGOS_1373 | Genomic island | TA192232 | NZ_CP069945 | 2363437..2379496 | 0.008 | |
| Escherichia coli strain UPEC129 | Genomic island | TA196541 | NZ_CP071522 | 2396268..2411417 | 0.009 | |
| Escherichia coli strain SYNB1934 | Genomic island | TA211358 | NZ_CP080246 | 3321797..3338739 | 0 | |
| Escherichia coli LF82 | Genomic island | TA214838 | NZ_CP082771 | 2334284..2355296 | 0.01 | |
| Escherichia coli O2:H1 strain HM670 | Genomic island | TA214865 | NZ_CP082772 | 2505682..2520631 | 0.003 | |
| Escherichia coli O16:H6 strain CU37RT-2 | Genomic island | TA214928 | NZ_CP082774 | 2394881..2411051 | 0.007 | |
| Escherichia coli O25:H1 strain CU39ES-1 | Genomic island | TA215002 | NZ_CP082777 | 2594936..2611878 | 0 | |
| Escherichia coli O2:K1:H4 strain APEC E12053 | Genomic island | TA283053 | NZ_CP126928 | 2416791..2433820 | 0.009 |