MGE detailed information
MGE type: Integron MGE length: 53131 bp
Accession: NZ_AP024550 Location: 835106..888236 Organism: Vibrio cholerae strain IDH-00113 Replicon: chromosome
Accession: NZ_AP024550 Location: 835106..888236 Organism: Vibrio cholerae strain IDH-00113 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J78_RS17340 | 830651..831157 | + | 507 | WP_001921103.1 | hypothetical protein | - |
| K6J78_RS17345 | 831218..831913 | - | 696 | WP_000213836.1 | hypothetical protein | - |
| K6J78_RS17350 | 831910..832850 | - | 941 | Protein_762 | IS3-like element ISVch4 family transposase | - |
| K6J78_RS17355 | 832869..834479 | - | 1611 | WP_002041336.1 | IS1634-like element ISSpu7 family transposase | - |
| K6J78_RS17360 | 834612..834854 | - | 243 | Protein_764 | transposase | - |
| K6J78_RS17365 | 835272..836279 | + | 1008 | WP_000093800.1 | DUF4365 domain-containing protein | - |
| K6J78_RS18735 | 836336..836386 | + | 51 | WP_228779804.1 | hypothetical protein | - |
| K6J78_RS17375 | 836504..836782 | + | 279 | WP_000280319.1 | DUF3709 domain-containing protein | - |
| K6J78_RS17380 | 837035..837430 | + | 396 | WP_000046952.1 | DUF6404 family protein | - |
| K6J78_RS18740 | 837529..837672 | + | 144 | Protein_769 | acetyltransferase | - |
| K6J78_RS17385 | 837795..837914 | + | 120 | WP_001900954.1 | DUF645 family protein | - |
| K6J78_RS17390 | 838091..838486 | + | 396 | WP_000046953.1 | DUF6404 family protein | - |
| K6J78_RS17395 | 838630..839166 | + | 537 | WP_000644491.1 | nucleotidyltransferase family protein | - |
| K6J78_RS18745 | 839517..839579 | + | 63 | Protein_773 | DUF645 family protein | - |
| K6J78_RS18750 | 839569..839679 | + | 111 | WP_223804330.1 | Tfp pilus assembly protein | - |
| K6J78_RS17405 | 839838..840263 | + | 426 | WP_000403014.1 | GNAT family N-acetyltransferase | - |
| K6J78_RS17410 | 840412..840759 | + | 348 | WP_000933409.1 | hypothetical protein | - |
| K6J78_RS17415 | 840906..841199 | + | 294 | WP_125460920.1 | hypothetical protein | - |
| K6J78_RS18755 | 841262..841437 | + | 176 | Protein_778 | acetyltransferase | - |
| K6J78_RS18760 | 841498..841650 | + | 153 | Protein_779 | DUF645 family protein | - |
| K6J78_RS17425 | 841844..842161 | - | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| K6J78_RS17430 | 842180..842423 | - | 244 | Protein_781 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| K6J78_RS17435 | 842665..843174 | + | 510 | WP_000405987.1 | GNAT family N-acetyltransferase | - |
| K6J78_RS17440 | 843231..843884 | + | 654 | WP_000226874.1 | hypothetical protein | - |
| K6J78_RS18765 | 843973..844182 | + | 210 | WP_001900246.1 | DUF3709 domain-containing protein | - |
| K6J78_RS17445 | 844194..844412 | + | 219 | WP_001917086.1 | DUF3709 domain-containing protein | - |
| K6J78_RS18770 | 844601..844794 | + | 194 | Protein_786 | hypothetical protein | - |
| K6J78_RS17450 | 844815..845048 | + | 234 | WP_032482776.1 | DUF3709 domain-containing protein | - |
| K6J78_RS17455 | 845473..845653 | + | 181 | Protein_788 | DUF645 family protein | - |
| K6J78_RS18775 | 845766..845879 | + | 114 | WP_001894955.1 | hypothetical protein | - |
| K6J78_RS17460 | 845920..846207 | + | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J78_RS17465 | 846218..846535 | + | 318 | WP_001232701.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| K6J78_RS18780 | 846532..846642 | + | 111 | WP_134814058.1 | DUF3265 domain-containing protein | - |
| K6J78_RS18785 | 846681..846791 | + | 111 | Protein_793 | acetyltransferase | - |
| K6J78_RS17470 | 846819..846944 | + | 126 | WP_001944767.1 | DUF645 family protein | - |
| K6J78_RS18790 | 846907..847023 | + | 117 | WP_001889170.1 | hypothetical protein | - |
| K6J78_RS17480 | 847211..848215 | + | 1005 | WP_000964925.1 | LD-carboxypeptidase | - |
| K6J78_RS17485 | 848368..848814 | + | 447 | WP_000128977.1 | hypothetical protein | - |
| K6J78_RS17490 | 848934..849863 | + | 930 | WP_000335802.1 | hypothetical protein | - |
| K6J78_RS18795 | 849860..849970 | + | 111 | WP_071917832.1 | DUF3265 domain-containing protein | - |
| K6J78_RS17495 | 849998..850474 | + | 477 | WP_001047180.1 | GNAT family N-acetyltransferase | - |
| K6J78_RS17500 | 850665..851126 | + | 462 | WP_001911752.1 | lipocalin family protein | - |
| K6J78_RS17505 | 851262..851552 | - | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J78_RS17510 | 851542..851790 | - | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6J78_RS17515 | 852415..854025 | + | 1611 | WP_002041336.1 | IS1634 family transposase ISSpu7 | Transposase |
| K6J78_RS17520 | 854128..854781 | + | 654 | WP_000036957.1 | site-specific DNA-methyltransferase | - |
| K6J78_RS17525 | 855053..855478 | + | 426 | WP_000415752.1 | hypothetical protein | - |
| K6J78_RS17530 | 855686..856081 | + | 396 | WP_000649527.1 | DUF3465 domain-containing protein | - |
| K6J78_RS17535 | 856232..856762 | + | 531 | WP_000415563.1 | hypothetical protein | - |
| K6J78_RS17540 | 856900..857400 | + | 501 | WP_000789723.1 | hypothetical protein | - |
| K6J78_RS17545 | 857556..857954 | + | 399 | WP_001882293.1 | hypothetical protein | - |
| K6J78_RS17550 | 858054..858518 | - | 465 | WP_000140244.1 | hypothetical protein | - |
| K6J78_RS17555 | 858901..859886 | - | 986 | Protein_812 | Sulfate-binding protein | VF |
| K6J78_RS18800 | 860057..860125 | + | 69 | Protein_813 | acetyltransferase | - |
| K6J78_RS17560 | 860137..860715 | + | 579 | WP_001020575.1 | DJ-1/PfpI family protein | - |
| K6J78_RS17565 | 861019..861189 | + | 171 | WP_001882300.1 | DUF645 family protein | - |
| K6J78_RS17570 | 861389..862246 | + | 858 | WP_001279526.1 | DUF2806 domain-containing protein | - |
| K6J78_RS17575 | 862402..862953 | + | 552 | WP_000821930.1 | hypothetical protein | - |
| K6J78_RS17580 | 863240..863443 | + | 204 | WP_001911745.1 | hypothetical protein | - |
| K6J78_RS17585 | 863700..863897 | + | 198 | WP_001894451.1 | DUF3709 domain-containing protein | - |
| K6J78_RS17590 | 864257..864526 | + | 270 | WP_001198131.1 | hypothetical protein | - |
| K6J78_RS17595 | 864862..865015 | + | 154 | Protein_821 | DUF645 family protein | - |
| K6J78_RS17600 | 865224..865610 | + | 387 | WP_000703163.1 | VOC family protein | - |
| K6J78_RS17605 | 865812..866054 | + | 243 | WP_000107463.1 | hypothetical protein | - |
| K6J78_RS17610 | 866225..866602 | + | 378 | WP_000411109.1 | hypothetical protein | - |
| K6J78_RS17615 | 866659..866773 | + | 115 | Protein_825 | acetyltransferase | - |
| K6J78_RS17620 | 866782..867003 | + | 222 | WP_032468461.1 | DUF1289 domain-containing protein | - |
| K6J78_RS17625 | 867169..867282 | + | 114 | WP_001889158.1 | hypothetical protein | - |
| K6J78_RS17630 | 867231..867458 | + | 228 | WP_001894457.1 | DUF1289 domain-containing protein | - |
| K6J78_RS17635 | 867799..868131 | + | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J78_RS17640 | 868118..868432 | + | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| K6J78_RS17645 | 868569..869003 | + | 435 | WP_000256036.1 | GNAT family N-acetyltransferase | - |
| K6J78_RS17650 | 869171..869326 | + | 156 | WP_000751734.1 | hypothetical protein | - |
| K6J78_RS17655 | 869451..870431 | - | 981 | WP_000019370.1 | IS5 family transposase ISVch5 | Transposase |
| K6J78_RS17660 | 870499..870805 | + | 307 | Protein_834 | Streptogramin A acetyltransferase | VF |
| K6J78_RS18805 | 870942..871340 | + | 399 | Protein_835 | GNAT family N-acetyltransferase | - |
| K6J78_RS18810 | 871464..871634 | + | 171 | WP_001080654.1 | hypothetical protein | Antitoxin Detail |
| K6J78_RS17670 | 871634..872035 | + | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| K6J78_RS18815 | 872038..872148 | + | 111 | WP_082798255.1 | DUF3265 domain-containing protein | - |
| K6J78_RS17675 | 872223..872636 | + | 414 | WP_000049417.1 | VOC family protein | - |
| K6J78_RS17680 | 872850..873101 | + | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6J78_RS17685 | 873091..873378 | + | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J78_RS17690 | 873506..873961 | + | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| K6J78_RS18820 | 874018..874140 | + | 123 | Protein_843 | acetyltransferase | - |
| K6J78_RS17695 | 874311..874435 | + | 125 | Protein_844 | DUF645 family protein | - |
| K6J78_RS18825 | 874552..874620 | + | 69 | Protein_845 | acetyltransferase | - |
| K6J78_RS17700 | 874637..875134 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K6J78_RS17705 | 875131..875403 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K6J78_RS18830 | 875555..875617 | + | 63 | Protein_848 | acetyltransferase | - |
| K6J78_RS17710 | 875634..876302 | + | 669 | WP_000043871.1 | hypothetical protein | - |
| K6J78_RS17715 | 876454..876741 | + | 288 | WP_000426470.1 | hypothetical protein | - |
| K6J78_RS17720 | 876882..877253 | + | 372 | WP_001164080.1 | MazG nucleotide pyrophosphohydrolase domain-containing protein | - |
| K6J78_RS18835 | 877476..877745 | + | 270 | WP_000179600.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K6J78_RS17730 | 877742..878275 | + | 534 | WP_000118351.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K6J78_RS18840 | 878285..878395 | + | 111 | WP_086010065.1 | DUF3265 domain-containing protein | - |
| K6J78_RS17735 | 878477..878734 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6J78_RS17740 | 878722..879024 | + | 303 | WP_000229317.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6J78_RS17745 | 879258..880175 | + | 918 | WP_000186333.1 | alpha/beta hydrolase | - |
| K6J78_RS17750 | 880332..880721 | + | 390 | WP_001081302.1 | hypothetical protein | - |
| K6J78_RS17755 | 880857..881066 | + | 210 | Protein_859 | GNAT family N-acetyltransferase | - |
| K6J78_RS17760 | 881185..881622 | + | 438 | WP_000503169.1 | IS200-IS605 family transposase IS1004 | Transposase |
| K6J78_RS17765 | 881683..881904 | + | 222 | Protein_861 | GNAT family N-acetyltransferase | - |
| K6J78_RS17770 | 882079..882951 | + | 873 | WP_000254716.1 | DUF3800 domain-containing protein | - |
| K6J78_RS17775 | 883101..883700 | + | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| K6J78_RS17780 | 883757..883825 | + | 69 | Protein_864 | acetyltransferase | - |
| K6J78_RS17785 | 883892..884161 | + | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| K6J78_RS17790 | 884155..884676 | + | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| K6J78_RS17795 | 884975..885100 | + | 126 | WP_001905700.1 | DUF645 family protein | - |
| K6J78_RS17800 | 885351..885746 | + | 396 | WP_001000867.1 | hypothetical protein | - |
| K6J78_RS17805 | 885885..886162 | - | 278 | Protein_869 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| K6J78_RS17810 | 886159..886443 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| K6J78_RS17815 | 886637..887152 | + | 516 | WP_000343779.1 | dTDP-fucosamine acetyltransferase | VF |
| K6J78_RS17820 | 887336..887749 | + | 414 | WP_000049420.1 | VOC family protein | - |
| K6J78_RS17825 | 888304..889480 | + | 1177 | WP_086014537.1 | IS3-like element ISVch4 family transposase | - |
| K6J78_RS17830 | 889899..892676 | + | 2778 | WP_000509636.1 | alkaline phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|