Detailed information of immunity protein


Summary

Immunity protein ID IMU00368 experimental
Cognate effector -
Related T6SS (Type) -
Strain Bacteroides ovatus strain 3725 D1 iv
Replicon chromosome
Sequence Protein sequence (330 a.a.); Nucleotide sequence (990 bp)
Description The cumulative protection afforded by orphan i6 and i7 genes underlies the ability of B. fragilis 638R to persist during T6S-mediated antagonism in vivo
Reference
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
External database links

Locus tag (Gene) DYI28_RS04745 (i6)
Coordinates (Strand) 1011398..1012387 (-)
NCBI ID 696266391
RefSeq NZ_CP041395
Uniprot ID A0A1F0IA47_9BACE
KEGG ID -
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-329 MDRIILFFLGSVLLLSGCKNSKQPEGYNSVNIIEYVNIYDENNRILTAQGSEYDYLYFGDNKDKGILAATNNFTKTYSYDNDSYCYTVEEPLSGSLLKTMRYTENSIEELVLENNKDTFSYSFSLYYDKNKPKYKKSIIILGDDPFSDSRYEEYYYYDNNGNNTKKIRHALNTGEREETYKFNDTDYKEAVNLVPSSDYKQNIECSLKQTVNDTLITRITLNGVLDRVMKEYTIGKKKIKEEFDNGMTLVNKETEYEENGLRVNVNHTLRNTGYSTDSIYYEGNKKVKHIYNSDYNGTITLEISEYDEQGNIIKKTKKLRWESDNEVTR


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
LIPO(Sec/SPII) 0.9991 pos: 17-18. LSG-CK. MDRIILFFLGSVLLLSG


  Protein sequence: 330 a.a.    .

>IMU00368 NZ_CP041395:c1012387-1011398 [Bacteroides ovatus]
MDRIILFFLGSVLLLSGCKNSKQPEGYNSVNIIEYVNIYDENNRILTAQGSEYDYLYFGDNKDKGILAATNNFTKTYSYD
NDSYCYTVEEPLSGSLLKTMRYTENSIEELVLENNKDTFSYSFSLYYDKNKPKYKKSIIILGDDPFSDSRYEEYYYYDNN
GNNTKKIRHALNTGEREETYKFNDTDYKEAVNLVPSSDYKQNIECSLKQTVNDTLITRITLNGVLDRVMKEYTIGKKKIK
EEFDNGMTLVNKETEYEENGLRVNVNHTLRNTGYSTDSIYYEGNKKVKHIYNSDYNGTITLEISEYDEQGNIIKKTKKLR
WESDNEVTR*

  Nucleotide sequence: 990 bp    .

>IMU00368 NZ_CP041395:c1012387-1011398 [Bacteroides ovatus]
ATGGATAGAATAATTTTATTTTTTTTAGGTAGTGTATTACTTTTATCGGGCTGCAAGAATAGTAAACAGCCGGAAGGCTA
TAATTCTGTTAATATTATTGAATATGTTAATATTTACGATGAAAACAACAGGATTCTAACTGCACAGGGTAGTGAATATG
ACTATCTCTATTTTGGAGACAATAAAGATAAAGGGATCTTGGCAGCGACAAATAATTTTACAAAGACATATAGTTATGAT
AATGATTCTTACTGCTATACCGTAGAGGAGCCCTTGTCAGGATCATTGCTAAAAACAATGAGATATACTGAAAATAGCAT
AGAAGAACTTGTATTGGAAAATAATAAGGATACATTTAGTTATTCTTTTTCCCTCTATTATGATAAGAATAAACCTAAGT
ATAAAAAAAGTATTATAATATTAGGAGATGACCCCTTTTCTGACTCAAGATATGAGGAATACTACTACTATGACAATAAT
GGAAATAATACCAAGAAAATCCGTCATGCCTTGAACACCGGGGAAAGAGAAGAAACCTATAAATTTAATGATACGGATTA
TAAGGAAGCTGTTAATCTTGTCCCTTCTTCCGATTACAAACAAAACATCGAATGTTCATTGAAACAAACTGTCAATGATA
CCTTAATCACTCGGATTACCTTAAACGGTGTACTTGATAGAGTGATGAAGGAATACACGATCGGAAAAAAGAAAATTAAG
GAAGAGTTTGACAATGGTATGACTTTAGTCAATAAAGAAACAGAGTATGAAGAAAACGGACTGAGGGTAAACGTCAATCA
TACTTTAAGAAATACAGGCTACTCAACCGACAGTATCTATTATGAAGGAAACAAAAAAGTTAAGCACATTTATAATTCTG
ACTATAATGGCACCATAACACTTGAAATTTCAGAATATGATGAACAAGGAAATATAATAAAGAAAACAAAAAAACTCCGA
TGGGAGTCAGATAATGAAGTTACCCGTTGA