Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   ABC811_RS09130 Genome accession   NZ_CP155535
Coordinates   1784806..1786302 (-) Length   498 a.a.
NCBI ID   WP_000759902.1    Uniprot ID   A0A0B7LLT8
Organism   Streptococcus pneumoniae strain PJ755/1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1779806..1791302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC811_RS09100 (ABC811_09100) rpmJ 1780032..1780148 (-) 117 WP_001808836.1 50S ribosomal protein L36 -
  ABC811_RS09105 (ABC811_09105) infA 1780173..1780391 (-) 219 WP_001029883.1 translation initiation factor IF-1 -
  ABC811_RS09110 (ABC811_09110) - 1780557..1781510 (-) 954 WP_001155321.1 IS30-like element ISSpn8 family transposase -
  ABC811_RS09115 (ABC811_09115) amiF 1781867..1782793 (-) 927 WP_001291293.1 ATP-binding cassette domain-containing protein Regulator
  ABC811_RS09120 (ABC811_09120) amiE 1782804..1783871 (-) 1068 WP_000159554.1 oligopeptide/dipeptide ABC transporter ATP-binding protein Regulator
  ABC811_RS09125 (ABC811_09125) amiD 1783880..1784806 (-) 927 WP_000103697.1 oligopeptide ABC transporter permease OppC Regulator
  ABC811_RS09130 (ABC811_09130) amiC 1784806..1786302 (-) 1497 WP_000759902.1 ABC transporter permease Regulator
  ABC811_RS09135 (ABC811_09135) amiA3 1786369..1788348 (-) 1980 WP_000742233.1 peptide ABC transporter substrate-binding protein Regulator
  ABC811_RS09140 (ABC811_09140) - 1789035..1790228 (-) 1194 WP_000835622.1 O-antigen ligase -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55609.14 Da        Isoelectric Point: 9.4436

>NTDB_id=997342 ABC811_RS09130 WP_000759902.1 1784806..1786302(-) (amiC) [Streptococcus pneumoniae strain PJ755/1]
MKKYIFMRVLRSLVSIFLVTTLTYTIIYTLVPRKLIFKQDPNYNKIATTADKRDNYENTVFERMGYIEYYDTKELQEKAS
SMDSSVTVEANATNKAIYEKYINQLGHGWTLGEFTESGQFYATREIPIFERVFHFYANLIDIDHTNKIQDPENPDLKRYL
RFENDPAIGWSLVGSGTKHKYLLYFNSQFPFVHQNFVNLNLGDSYPTYANTPVLQVITQGQGQTKTAQVQFPTGKKTSSV
NIYSRTYKSPSQADSREVASYGKDDPYTATESNYQYPSMIVSSAITGLIGLVLAYALAVPLGSAMARFKNTWIDSLSTGA
LTFLLALPTIALVYIVRLIGSSIALPDSFPILGAGDWRSYVLPAVILGLLGAPGTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPGAIIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSRLLGD
IWMTIIDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=997342 ABC811_RS09130 WP_000759902.1 1784806..1786302(-) (amiC) [Streptococcus pneumoniae strain PJ755/1]
ATGAAAAAATATATTTTTATGCGTGTTTTGCGGTCATTGGTTTCGATTTTCTTAGTAACGACTTTGACCTACACGATTAT
CTATACCTTGGTTCCTCGAAAATTGATTTTCAAGCAGGATCCTAACTATAATAAAATTGCAACAACGGCTGATAAACGTG
ATAACTATGAAAATACTGTGTTTGAGCGTATGGGCTACATTGAGTATTACGATACTAAAGAGTTGCAAGAAAAGGCAAGT
AGCATGGATTCTTCTGTAACAGTAGAAGCAAATGCGACCAATAAAGCTATTTATGAAAAGTACATCAATCAATTAGGTCA
TGGTTGGACTTTGGGAGAATTTACTGAAAGTGGTCAATTCTATGCTACTCGTGAAATTCCAATTTTTGAACGTGTTTTTC
ACTTCTATGCTAACTTGATTGACATTGACCATACAAATAAAATCCAAGACCCTGAAAATCCAGACTTGAAACGCTACCTT
CGTTTTGAAAATGATCCAGCTATCGGATGGTCATTGGTCGGTTCAGGAACTAAACATAAATATCTCTTGTACTTTAACAG
TCAGTTCCCATTTGTTCATCAAAACTTTGTGAACTTGAATTTAGGTGACTCTTACCCAACCTATGCTAATACACCAGTTC
TTCAGGTTATTACTCAAGGTCAAGGACAAACCAAAACTGCCCAAGTTCAGTTCCCAACAGGTAAGAAAACGTCTTCTGTA
AATATTTACTCAAGAACCTACAAGTCACCTAGTCAGGCTGACTCTCGTGAAGTAGCTAGCTATGGGAAAGATGATCCTTA
TACAGCGACTGAAAGTAATTACCAATATCCATCTATGATTGTCAGCTCTGCTATTACTGGTTTGATTGGTTTGGTTCTTG
CCTATGCTCTTGCCGTGCCACTTGGTTCAGCCATGGCTCGTTTCAAGAACACTTGGATTGATAGCCTCTCAACAGGGGCT
TTGACCTTCTTGCTTGCTCTTCCAACGATTGCCTTGGTTTACATCGTTCGATTGATTGGATCATCTATTGCCCTTCCAGA
TTCATTCCCTATCTTGGGAGCTGGAGATTGGCGTTCTTACGTTTTACCAGCAGTCATCCTTGGTTTGTTGGGTGCTCCTG
GTACAGCCATTTGGATTCGTCGTTACATGATTGACTTGCAATCTCAAGACTTTGTTCGTTTCGCTCGTGCAAAAGGTTTG
TCTGAAAAAGAAATTTCAAACAAACACATCTTTAAAAATGCCATGGTTCCGCTGGTTTCAGGAATTCCTGGTGCCATCAT
TGGGGTTATCGGTGGTGCAACCCTTACTGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTAA
AAGCATCTAATAACTCTATGGTCGTTGGTCTTGTCTTCATCTTTACATGTATTTCTATCTTCTCACGTCTTTTGGGAGAT
ATTTGGATGACTATTATTGACCCACGTATTAAATTGACTGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7LLT8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

77.108

100

0.771
  amiC Streptococcus thermophilus LMG 18311

76.908

100

0.769
  amiC Streptococcus thermophilus LMD-9

76.506

100

0.765

Multiple sequence alignment