Detailed information NTG0997339

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ABC811_RS09115
• Genome accession: NZ_CP155535
• Coordinates: 1781867..1782793 (-)
• Length: 308 a.a.
• NCBI ID: WP_001291293.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PJ755/1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1776867..1787793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC811_RS09075 (ABC811_09075)	-	1777341..1777607 (-)	267	WP_000644124.1	ACT domain-containing protein	-
ABC811_RS09080 (ABC811_09080)	rplQ	1777872..1778258 (-)	387	WP_000331493.1	50S ribosomal protein L17	-
ABC811_RS09085 (ABC811_09085)	-	1778270..1779205 (-)	936	WP_000568988.1	DNA-directed RNA polymerase subunit alpha	-
ABC811_RS09090 (ABC811_09090)	rpsK	1779248..1779631 (-)	384	WP_001118385.1	30S ribosomal protein S11	-
ABC811_RS09095 (ABC811_09095)	rpsM	1779649..1780014 (-)	366	WP_000090781.1	30S ribosomal protein S13	-
ABC811_RS09100 (ABC811_09100)	rpmJ	1780032..1780148 (-)	117	WP_001808836.1	50S ribosomal protein L36	-
ABC811_RS09105 (ABC811_09105)	infA	1780173..1780391 (-)	219	WP_001029883.1	translation initiation factor IF-1	-
ABC811_RS09110 (ABC811_09110)	-	1780557..1781510 (-)	954	WP_001155321.1	IS30-like element ISSpn8 family transposase	-
ABC811_RS09115 (ABC811_09115)	amiF	1781867..1782793 (-)	927	WP_001291293.1	ATP-binding cassette domain-containing protein	Regulator
ABC811_RS09120 (ABC811_09120)	amiE	1782804..1783871 (-)	1068	WP_000159554.1	oligopeptide/dipeptide ABC transporter ATP-binding protein	Regulator
ABC811_RS09125 (ABC811_09125)	amiD	1783880..1784806 (-)	927	WP_000103697.1	oligopeptide ABC transporter permease OppC	Regulator
ABC811_RS09130 (ABC811_09130)	amiC	1784806..1786302 (-)	1497	WP_000759902.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34796.85 Da
• Isoelectric Point: 6.6224

>NTDB_id=997339 ABC811_RS09115 WP_001291293.1 1781867..1782793(-) (amiF) [Streptococcus pneumoniae strain PJ755/1]
MSEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSNGDIIFDGQKINGKKSRE
QAAELIRRIQMIFQDPAASLNERATVDYIISEGLYNHRLFKDEEERKEKVQNIIREVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMQPDFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
NPIHPYTQALLSAVPIPDPILERKKVLKVYDPSQHDYETDKPSMVEIRPGHYVWANQAELARYQKGLN

Nucleotide

• Length: 927 bp

>NTDB_id=997339 ABC811_RS09115 WP_001291293.1 1781867..1782793(-) (amiF) [Streptococcus pneumoniae strain PJ755/1]
ATGTCTGAAAAATTAGTAGAAATCAAAGATTTAGAAATTTCCTTCGGTGAAGGAAGTAAGAAGTTTGTCGCGGTTAAAAA
TGCTAACTTCTTTATCAACAAGGGAGAAACTTTCTCGCTTGTAGGTGAGTCCGGTAGTGGGAAAACAACTATTGGTCGTG
CTATCATCGGTCTAAATGATACAAGTAATGGAGATATCATTTTTGATGGTCAAAAGATTAATGGTAAGAAATCGCGTGAA
CAAGCTGCGGAATTGATTCGTCGAATCCAGATGATTTTCCAAGACCCTGCTGCAAGTTTGAATGAACGTGCGACTGTTGA
TTATATTATTTCTGAAGGTCTTTACAATCACCGTTTATTTAAGGATGAAGAAGAACGTAAAGAGAAAGTTCAAAATATTA
TCCGTGAAGTAGGTCTTCTTGCTGAGCACTTGACTCGTTACCCTCATGAATTCTCAGGCGGTCAACGTCAACGTATCGGT
ATTGCCCGTGCCTTGGTCATGCAACCAGACTTTGTTATTGCAGATGAGCCAATTTCAGCCTTGGACGTTTCTGTACGTGC
CCAAGTCTTGAACTTGCTCAAAAAATTCCAAAAAGAGCTCGGCCTGACCTATCTCTTCATCGCCCATGACTTGTCGGTTG
TTCGCTTTATTTCAGATCGTATCGCAGTTATTTACAAGGGTGTTATTGTAGAGGTTGCAGAAACAGAAGAATTGTTTAAC
AATCCAATTCACCCATATACTCAAGCCTTGCTTTCAGCGGTACCAATCCCAGATCCAATCTTGGAACGTAAGAAGGTCTT
GAAGGTTTACGACCCAAGTCAACACGACTATGAGACTGATAAGCCATCTATGGTAGAAATCCGTCCAGGTCACTATGTTT
GGGCGAACCAAGCCGAATTGGCACGTTATCAAAAAGGACTAAACTAA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	85.574	99.026	0.847
amiF	Streptococcus salivarius strain HSISS4	85.574	99.026	0.847
amiF	Streptococcus thermophilus LMD-9	85.246	99.026	0.844