Detailed information NTG0997341

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: ABC811_RS09125
• Genome accession: NZ_CP155535
• Coordinates: 1783880..1784806 (-)
• Length: 308 a.a.
• NCBI ID: WP_000103697.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PJ755/1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1778880..1789806

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC811_RS09090 (ABC811_09090)	rpsK	1779248..1779631 (-)	384	WP_001118385.1	30S ribosomal protein S11	-
ABC811_RS09095 (ABC811_09095)	rpsM	1779649..1780014 (-)	366	WP_000090781.1	30S ribosomal protein S13	-
ABC811_RS09100 (ABC811_09100)	rpmJ	1780032..1780148 (-)	117	WP_001808836.1	50S ribosomal protein L36	-
ABC811_RS09105 (ABC811_09105)	infA	1780173..1780391 (-)	219	WP_001029883.1	translation initiation factor IF-1	-
ABC811_RS09110 (ABC811_09110)	-	1780557..1781510 (-)	954	WP_001155321.1	IS30-like element ISSpn8 family transposase	-
ABC811_RS09115 (ABC811_09115)	amiF	1781867..1782793 (-)	927	WP_001291293.1	ATP-binding cassette domain-containing protein	Regulator
ABC811_RS09120 (ABC811_09120)	amiE	1782804..1783871 (-)	1068	WP_000159554.1	oligopeptide/dipeptide ABC transporter ATP-binding protein	Regulator
ABC811_RS09125 (ABC811_09125)	amiD	1783880..1784806 (-)	927	WP_000103697.1	oligopeptide ABC transporter permease OppC	Regulator
ABC811_RS09130 (ABC811_09130)	amiC	1784806..1786302 (-)	1497	WP_000759902.1	ABC transporter permease	Regulator
ABC811_RS09135 (ABC811_09135)	amiA3	1786369..1788348 (-)	1980	WP_000742233.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34648.79 Da
• Isoelectric Point: 9.7939

>NTDB_id=997341 ABC811_RS09125 WP_000103697.1 1783880..1784806(-) (amiD) [Streptococcus pneumoniae strain PJ755/1]
MSTIDKEKFQFVKRDDFASETIDAPAYSYWKSVFKQFMKKKSTVVMLGILVAIILISFIYPMFSKFDFNDVSKVNDFSIR
YIKPNAEHWFGTDSNGKSLFDGVWFGARNSILISVIATVINLVIGVFVGGIWGISKSVDRVMMEVYNVISNIPPLLIVIV
LTYSIGAGFWNLIFAMSVTTWIGIAFMIRVQILRYRDLEYNLASRTLGTPTLKIVAKNIMPQLVSVIVTTMTQMLPSFIS
YEAFLSFFGLGLPITVPSLGRLISDYSQNVTTNAYLFWIPLTTLVLVSLSLFVVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=997341 ABC811_RS09125 WP_000103697.1 1783880..1784806(-) (amiD) [Streptococcus pneumoniae strain PJ755/1]
ATGTCTACAATCGATAAAGAAAAATTTCAGTTTGTAAAACGTGACGATTTTGCCTCTGAAACTATTGATGCGCCAGCATA
TTCTTACTGGAAATCAGTGTTTAAACAATTTATGAAGAAAAAATCAACTGTAGTCATGTTGGGAATCTTGGTAGCCATCA
TTTTGATAAGTTTCATCTACCCAATGTTTTCTAAGTTTGATTTCAATGATGTCAGCAAGGTAAACGACTTTAGTATTCGT
TATATCAAGCCAAATGCGGAGCATTGGTTCGGTACTGACAGTAACGGTAAATCGCTCTTTGACGGTGTCTGGTTCGGAGC
TCGTAACTCCATCCTCATTTCTGTGATTGCGACAGTGATTAACTTGGTTATCGGTGTTTTTGTCGGTGGTATTTGGGGTA
TTTCAAAATCAGTTGACCGTGTCATGATGGAAGTTTACAACGTCATCTCAAACATCCCACCTCTTTTGATTGTTATTGTC
TTGACTTACTCAATCGGAGCTGGATTCTGGAATCTGATTTTTGCCATGAGCGTAACAACATGGATTGGTATCGCCTTCAT
GATCCGTGTGCAAATCTTGCGCTATCGTGACTTGGAATACAACTTGGCATCACGTACTTTGGGAACACCAACCTTGAAGA
TTGTTGCCAAAAATATCATGCCTCAATTGGTATCTGTTATTGTGACAACCATGACTCAAATGCTTCCAAGCTTTATCTCA
TACGAAGCCTTCTTGTCTTTCTTCGGTCTTGGATTACCGATTACAGTGCCAAGTTTGGGTCGTTTGATTTCGGATTATTC
ACAAAACGTAACAACCAATGCTTACTTGTTCTGGATTCCATTGACAACCCTTGTCTTGGTATCCTTGTCCCTTTTCGTAG
TTGGTCAAAACTTAGCGGATGCTAGTGATCCACGTACACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (124-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	82.792	100	0.828
amiD	Streptococcus thermophilus LMG 18311	81.169	100	0.812
amiD	Streptococcus thermophilus LMD-9	81.169	100	0.812