Detailed information NTG0997237

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: ABC799_RS01160
• Genome accession: NZ_CP155534
• Coordinates: 221943..222404 (+)
• Length: 153 a.a.
• NCBI ID: WP_000250531.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain DCC1476
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 216943..227404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC799_RS01125 (ABC799_01125)	-	217438..218496 (+)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
ABC799_RS01130 (ABC799_01130)	-	218647..219012 (+)	366	WP_000286415.1	DUF1033 family protein	-
ABC799_RS01135 (ABC799_01135)	comGA/cglA/cilD	219088..220029 (+)	942	WP_000249536.1	competence type IV pilus ATPase ComGA	Machinery gene
ABC799_RS01140 (ABC799_01140)	comGB/cglB	219977..220993 (+)	1017	WP_078130737.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABC799_RS01145 (ABC799_01145)	comGC/cglC	220995..221318 (+)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
ABC799_RS01150 (ABC799_01150)	comGD/cglD	221281..221715 (+)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
ABC799_RS01155 (ABC799_01155)	comGE/cglE	221678..221980 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
ABC799_RS01160 (ABC799_01160)	comGF/cglF	221943..222404 (+)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
ABC799_RS01165 (ABC799_01165)	comGG/cglG	222382..222774 (+)	393	WP_050202681.1	competence type IV pilus minor pilin ComGG	Machinery gene
ABC799_RS01170 (ABC799_01170)	-	222930..223522 (+)	593	Protein_214	methyltransferase domain-containing protein	-
ABC799_RS01175 (ABC799_01175)	comYH	223583..224536 (+)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
ABC799_RS01180 (ABC799_01180)	-	224587..225777 (+)	1191	WP_000167765.1	acetate kinase	-
ABC799_RS01185 (ABC799_01185)	-	225778..225909 (+)	132	WP_000768904.1	hypothetical protein	-
ABC799_RS01190 (ABC799_01190)	rnpA	225926..226297 (+)	372	WP_000739246.1	ribonuclease P protein component	-
ABC799_RS01195 (ABC799_01195)	-	226272..227096 (+)	825	WP_000727904.1	membrane protein insertase YidC	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17849.37 Da
• Isoelectric Point: 6.4832

>NTDB_id=997237 ABC799_RS01160 WP_000250531.1 221943..222404(+) (comGF/cglF) [Streptococcus pneumoniae strain DCC1476]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEVELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=997237 ABC799_RS01160 WP_000250531.1 221943..222404(+) (comGF/cglF) [Streptococcus pneumoniae strain DCC1476]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGTAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	95.425	100	0.954
comGF/cglF	Streptococcus pneumoniae D39	95.425	100	0.954
comGF/cglF	Streptococcus pneumoniae R6	95.425	100	0.954
comGF/cglF	Streptococcus pneumoniae TIGR4	95.425	100	0.954
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus mitis NCTC 12261	91.503	100	0.915