Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG/cglG   Type   Machinery gene
Locus tag   ABC799_RS01165 Genome accession   NZ_CP155534
Coordinates   222382..222774 (+) Length   130 a.a.
NCBI ID   WP_050202681.1    Uniprot ID   A0A4J2BTN4
Organism   Streptococcus pneumoniae strain DCC1476     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 217382..227774
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC799_RS01125 (ABC799_01125) - 217438..218496 (+) 1059 WP_000649468.1 zinc-dependent alcohol dehydrogenase family protein -
  ABC799_RS01130 (ABC799_01130) - 218647..219012 (+) 366 WP_000286415.1 DUF1033 family protein -
  ABC799_RS01135 (ABC799_01135) comGA/cglA/cilD 219088..220029 (+) 942 WP_000249536.1 competence type IV pilus ATPase ComGA Machinery gene
  ABC799_RS01140 (ABC799_01140) comGB/cglB 219977..220993 (+) 1017 WP_078130737.1 competence type IV pilus assembly protein ComGB Machinery gene
  ABC799_RS01145 (ABC799_01145) comGC/cglC 220995..221318 (+) 324 WP_000738628.1 comG operon protein ComGC Machinery gene
  ABC799_RS01150 (ABC799_01150) comGD/cglD 221281..221715 (+) 435 WP_033606693.1 competence type IV pilus minor pilin ComGD Machinery gene
  ABC799_RS01155 (ABC799_01155) comGE/cglE 221678..221980 (+) 303 WP_000413382.1 competence type IV pilus minor pilin ComGE Machinery gene
  ABC799_RS01160 (ABC799_01160) comGF/cglF 221943..222404 (+) 462 WP_000250531.1 competence type IV pilus minor pilin ComGF Machinery gene
  ABC799_RS01165 (ABC799_01165) comGG/cglG 222382..222774 (+) 393 WP_050202681.1 competence type IV pilus minor pilin ComGG Machinery gene
  ABC799_RS01170 (ABC799_01170) - 222930..223522 (+) 593 Protein_214 methyltransferase domain-containing protein -
  ABC799_RS01175 (ABC799_01175) comYH 223583..224536 (+) 954 WP_000345126.1 class I SAM-dependent methyltransferase Machinery gene
  ABC799_RS01180 (ABC799_01180) - 224587..225777 (+) 1191 WP_000167765.1 acetate kinase -
  ABC799_RS01185 (ABC799_01185) - 225778..225909 (+) 132 WP_000768904.1 hypothetical protein -
  ABC799_RS01190 (ABC799_01190) rnpA 225926..226297 (+) 372 WP_000739246.1 ribonuclease P protein component -
  ABC799_RS01195 (ABC799_01195) - 226272..227096 (+) 825 WP_000727904.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 130 a.a.        Molecular weight: 15119.52 Da        Isoelectric Point: 10.3195

>NTDB_id=997238 ABC799_RS01165 WP_050202681.1 222382..222774(+) (comGG/cglG) [Streptococcus pneumoniae strain DCC1476]
MWKKKKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKVEQESGEQVFNLGQVSYQNKK
TGLVTRVRTDKSQYEFLFSSVKIKEEKTDKKEEVVTDSSEKAEKKIRREA

Nucleotide


Download         Length: 393 bp        

>NTDB_id=997238 ABC799_RS01165 WP_050202681.1 222382..222774(+) (comGG/cglG) [Streptococcus pneumoniae strain DCC1476]
GTGTGGAAAAAGAAGAAAGTTAAGGCAGGTGTTCTCCTCTATGCAGTCACCATGGCAGCTATCTTTAGTCTTTTGTTGCA
ATTTTACTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCTATGGCTA
AACGAACCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGTTTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACTGGCTTAGTGACGAGGGTTCGTACGGATAAGAGTCAATATGAGTTTCTGTTTTCTTCAGTCAAAATCAAAGAAGAGAA
AACGGATAAAAAGGAAGAGGTAGTGACTGATTCAAGCGAAAAAGCGGAGAAAAAAATCAGAAGAGAAGCCTGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4J2BTN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus pneumoniae Rx1

95.726

90

0.862

  comGG/cglG Streptococcus pneumoniae D39

95.726

90

0.862

  comGG/cglG Streptococcus pneumoniae R6

95.726

90

0.862

  comGG/cglG Streptococcus pneumoniae TIGR4

95.726

90

0.862

  comGG/cglG Streptococcus mitis NCTC 12261

90.984

93.846

0.854

  comGG/cglG Streptococcus mitis SK321

87.705

93.846

0.823


Multiple sequence alignment