Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ABC799_RS01175 | Genome accession | NZ_CP155534 |
| Coordinates | 223583..224536 (+) | Length | 317 a.a. |
| NCBI ID | WP_000345126.1 | Uniprot ID | A0A0F7YBB9 |
| Organism | Streptococcus pneumoniae strain DCC1476 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 218583..229536
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC799_RS01130 (ABC799_01130) | - | 218647..219012 (+) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| ABC799_RS01135 (ABC799_01135) | comGA/cglA/cilD | 219088..220029 (+) | 942 | WP_000249536.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABC799_RS01140 (ABC799_01140) | comGB/cglB | 219977..220993 (+) | 1017 | WP_078130737.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABC799_RS01145 (ABC799_01145) | comGC/cglC | 220995..221318 (+) | 324 | WP_000738628.1 | comG operon protein ComGC | Machinery gene |
| ABC799_RS01150 (ABC799_01150) | comGD/cglD | 221281..221715 (+) | 435 | WP_033606693.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABC799_RS01155 (ABC799_01155) | comGE/cglE | 221678..221980 (+) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABC799_RS01160 (ABC799_01160) | comGF/cglF | 221943..222404 (+) | 462 | WP_000250531.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABC799_RS01165 (ABC799_01165) | comGG/cglG | 222382..222774 (+) | 393 | WP_050202681.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ABC799_RS01170 (ABC799_01170) | - | 222930..223522 (+) | 593 | Protein_214 | methyltransferase domain-containing protein | - |
| ABC799_RS01175 (ABC799_01175) | comYH | 223583..224536 (+) | 954 | WP_000345126.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ABC799_RS01180 (ABC799_01180) | - | 224587..225777 (+) | 1191 | WP_000167765.1 | acetate kinase | - |
| ABC799_RS01185 (ABC799_01185) | - | 225778..225909 (+) | 132 | WP_000768904.1 | hypothetical protein | - |
| ABC799_RS01190 (ABC799_01190) | rnpA | 225926..226297 (+) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| ABC799_RS01195 (ABC799_01195) | - | 226272..227096 (+) | 825 | WP_000727904.1 | membrane protein insertase YidC | - |
| ABC799_RS01200 (ABC799_01200) | jag | 227115..228101 (+) | 987 | WP_000260018.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| ABC799_RS01205 (ABC799_01205) | - | 228152..228775 (+) | 624 | WP_000932658.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35714.87 Da Isoelectric Point: 4.2434
>NTDB_id=997239 ABC799_RS01175 WP_000345126.1 223583..224536(+) (comYH) [Streptococcus pneumoniae strain DCC1476]
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKNEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKNEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=997239 ABC799_RS01175 WP_000345126.1 223583..224536(+) (comYH) [Streptococcus pneumoniae strain DCC1476]
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTGACCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTACTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAATGAAATAGCAGTAGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTGACCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTACTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAATGAAATAGCAGTAGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
54.633 |
98.738 |
0.539 |
| comYH | Streptococcus mutans UA159 |
54.313 |
98.738 |
0.536 |