Detailed information NTG0995088

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: AAVC94_RS16455
• Genome accession: NZ_CP154906
• Coordinates: 3177220..3177726 (-)
• Length: 168 a.a.
• NCBI ID: WP_050782676.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain FUA2115
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3172220..3182726

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVC94_RS16420 (AAVC94_16420)	fliW	3172353..3172787 (-)	435	WP_044139341.1	flagellar assembly protein FliW	-
AAVC94_RS16425 (AAVC94_16425)	-	3172816..3173394 (-)	579	WP_003213106.1	DUF6470 family protein	-
AAVC94_RS16430 (AAVC94_16430)	flgL	3173443..3174354 (-)	912	WP_137054345.1	flagellar hook-associated protein FlgL	-
AAVC94_RS16435 (AAVC94_16435)	flgK	3174364..3175884 (-)	1521	WP_253622115.1	flagellar hook-associated protein FlgK	-
AAVC94_RS16440 (AAVC94_16440)	-	3175900..3176382 (-)	483	WP_050944342.1	flagellar protein FlgN	-
AAVC94_RS16445 (AAVC94_16445)	flgM	3176401..3176664 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
AAVC94_RS16450 (AAVC94_16450)	-	3176744..3177163 (-)	420	WP_003212865.1	TIGR03826 family flagellar region protein	-
AAVC94_RS16455 (AAVC94_16455)	comFC	3177220..3177726 (-)	507	WP_050782676.1	phosphoribosyltransferase family protein	Machinery gene
AAVC94_RS16460 (AAVC94_16460)	-	3177739..3177906 (-)	168	Protein_3174	ComF family protein	-
AAVC94_RS16465 (AAVC94_16465)	-	3177903..3178196 (-)	294	WP_106066158.1	late competence development ComFB family protein	-
AAVC94_RS16470 (AAVC94_16470)	comFA	3178263..3179387 (-)	1125	WP_253622114.1	DEAD/DEAH box helicase	Machinery gene
AAVC94_RS16475 (AAVC94_16475)	-	3179762..3180604 (-)	843	WP_226804196.1	DegV family protein	-
AAVC94_RS16480 (AAVC94_16480)	degU	3180822..3181511 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator

Sequence

Protein

• Length: 168 a.a.
• Molecular weight: 19220.45 Da
• Isoelectric Point: 10.5872

>NTDB_id=995088 AAVC94_RS16455 WP_050782676.1 3177220..3177726(-) (comFC) [Bacillus pumilus strain FUA2115]
MWKERPDSTTVLVKNRSVYAYNDLMKDVLSRFKFRGDTALAELFKQDVRAVFKRSFSMKEPVLIPIPLSKERLKERGFNQ
SVILASLIGEPILQPLVKIHQSKQSKKKKNERLDQKGMFQITQTDAIVQREVILIDDIYTTGATIYDAARILKEAGAKSV
SSFTLIRS

Nucleotide

• Length: 507 bp

>NTDB_id=995088 AAVC94_RS16455 WP_050782676.1 3177220..3177726(-) (comFC) [Bacillus pumilus strain FUA2115]
ATGTGGAAAGAACGCCCTGATTCTACTACAGTACTTGTGAAAAATAGGTCTGTCTATGCTTACAACGATTTGATGAAAGA
TGTCCTTTCCCGCTTTAAATTTCGAGGTGATACAGCTTTAGCTGAGCTTTTTAAACAAGATGTCCGAGCAGTATTTAAGC
GCTCTTTTTCAATGAAAGAACCTGTGCTGATCCCGATTCCTTTAAGTAAAGAAAGACTAAAGGAAAGAGGGTTTAATCAG
TCCGTCATACTTGCTTCCTTGATTGGTGAGCCGATCCTTCAGCCACTTGTAAAAATACATCAAAGCAAACAGTCCAAGAA
AAAGAAAAATGAACGTTTAGATCAAAAAGGAATGTTTCAAATCACGCAGACAGATGCGATCGTTCAAAGGGAAGTTATCT
TAATTGACGACATTTATACAACAGGGGCCACCATTTATGATGCGGCGAGAATTTTAAAAGAAGCAGGTGCCAAAAGTGTT
TCCTCTTTTACGTTGATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (76-166)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	52.071	100	0.524
comFC/cflB	Streptococcus mitis NCTC 12261	40.764	93.452	0.381
comFC/cflB	Streptococcus pneumoniae TIGR4	40.127	93.452	0.375
comFC/cflB	Streptococcus pneumoniae Rx1	40.127	93.452	0.375
comFC/cflB	Streptococcus pneumoniae D39	40.127	93.452	0.375
comFC/cflB	Streptococcus pneumoniae R6	40.127	93.452	0.375
comFC/cflB	Streptococcus mitis SK321	40.127	93.452	0.375