Detailed information NTG0099436

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: QMG27_RS00245
• Genome accession: NZ_AP027058
• Coordinates: 59143..60720 (-)
• Length: 525 a.a.
• NCBI ID: WP_281811979.1
• Uniprot ID: -
• Organism: Limnohabitans sp. MORI2
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 54143..65720

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG27_RS00215 (LMORI2_00440)	-	54250..55095 (+)	846	WP_281811965.1	DUF692 domain-containing protein	-
QMG27_RS00220 (LMORI2_00450)	-	55095..55835 (+)	741	WP_281811967.1	putative DNA-binding domain-containing protein	-
QMG27_RS00225 (LMORI2_00460)	-	55832..56407 (+)	576	WP_281811970.1	DoxX family protein	-
QMG27_RS00230 (LMORI2_00470)	-	56320..57513 (-)	1194	WP_281811973.1	MFS transporter	-
QMG27_RS00235 (LMORI2_00480)	-	57690..58415 (+)	726	WP_281811975.1	DUF692 family multinuclear iron-containing protein	-
QMG27_RS00240 (LMORI2_00490)	-	58409..59146 (+)	738	WP_281811977.1	putative DNA-binding domain-containing protein	-
QMG27_RS00245 (LMORI2_00500)	comM	59143..60720 (-)	1578	WP_281811979.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
QMG27_RS00250 (LMORI2_00510)	-	60930..61706 (+)	777	WP_281811981.1	TorF family putative porin	-
QMG27_RS00255 (LMORI2_00520)	-	61737..62075 (+)	339	WP_281811983.1	P-II family nitrogen regulator	-
QMG27_RS00260 (LMORI2_00530)	amt	62091..63506 (+)	1416	WP_281811985.1	ammonium transporter	-
QMG27_RS00265 (LMORI2_00540)	glcE	63633..64808 (+)	1176	WP_281814682.1	glycolate oxidase subunit GlcE	-

Sequence

Protein

• Length: 525 a.a.
• Molecular weight: 55543.74 Da
• Isoelectric Point: 8.0135

>NTDB_id=99436 QMG27_RS00245 WP_281811979.1 59143..60720(-) (comM) [Limnohabitans sp. MORI2]
MSLALIHSRALLGLQAPAVTVEVHLANGLPSFTLVGLADTEVKEARERVRCAIQNAGLEFPSNKRITVNLAPADLPKDSG
RFDLPIALGILAAHGQLDIAALAQHEFAGELSLSGELRPVRGALAMGLALRGSGVRTRLVLPLGSAEEAALVPTAEVYRA
QHLSDVVAHFAKPEVKGLMAQREEGNSHVAHTTEGWCRIEAPSLIATQGNAPHTNISDLADVRGQAMARRALEIAAAGGH
SLLLVGPPGTGKSMLAQRFAALLPEMTLDEALESAAVASLAGRFELNQWMQRPTRSPHHTATSVALVGGGTPPRPGEISL
AHNGVLFLDELAEVKRSALEALREPLENGHITISRAATQAKFPARFQLIAAMNPCPCGYLGSSVKACRCTPDQVTRYQGK
LSGPLLDRIDLQVEVPTLTADVLMQTAPGESTATVRARCLAAHAKAIARQDVPNQALQGQALEAHMQLDAAAATFLQNAA
TKLGWSSRSTHRAIRVARTIADLAGSTAIQVAHVAEALQYRRVLT

Nucleotide

• Length: 1578 bp

>NTDB_id=99436 QMG27_RS00245 WP_281811979.1 59143..60720(-) (comM) [Limnohabitans sp. MORI2]
ATGTCGCTTGCTTTGATTCACAGCCGCGCACTCTTGGGTTTGCAGGCACCGGCTGTCACCGTCGAGGTGCATTTGGCCAA
TGGTCTGCCAAGCTTCACGCTGGTGGGTTTGGCCGATACCGAAGTGAAGGAAGCGCGCGAGCGGGTACGGTGCGCCATTC
AAAACGCGGGGCTGGAGTTTCCAAGCAATAAGAGAATCACCGTTAACTTGGCGCCAGCCGATCTACCCAAAGACTCGGGG
CGCTTTGATTTACCGATCGCTTTGGGCATCTTGGCTGCGCATGGGCAGCTAGACATCGCCGCGTTGGCTCAACATGAATT
TGCTGGCGAGTTATCTTTATCGGGGGAGTTACGGCCCGTGCGTGGTGCATTGGCCATGGGGCTGGCACTTCGCGGTTCGG
GTGTGCGCACGCGCTTGGTGTTACCTCTCGGCAGCGCAGAAGAAGCTGCACTTGTCCCCACGGCCGAGGTCTACCGCGCC
CAGCACTTGAGCGATGTGGTGGCGCACTTTGCAAAACCAGAGGTGAAGGGCTTGATGGCTCAGCGCGAAGAAGGCAACAG
CCATGTTGCACACACCACAGAAGGGTGGTGTCGCATCGAAGCGCCGTCGCTGATTGCGACACAAGGCAATGCCCCTCACA
CAAACATCAGCGACTTGGCAGATGTCAGAGGACAAGCCATGGCACGTCGCGCCCTTGAGATTGCAGCGGCGGGTGGTCAC
TCGCTTTTACTAGTGGGCCCACCTGGCACAGGCAAGTCCATGTTGGCACAACGCTTTGCAGCCCTACTGCCTGAGATGAC
CTTAGATGAAGCTTTAGAAAGCGCTGCCGTTGCCAGCTTGGCAGGACGCTTTGAATTGAACCAGTGGATGCAGCGGCCCA
CGCGCAGCCCACATCACACGGCCACCTCGGTGGCGTTGGTCGGTGGCGGCACACCGCCGCGCCCGGGCGAGATATCGCTT
GCGCACAACGGTGTGCTCTTCCTGGATGAGCTGGCCGAGGTCAAACGAAGCGCTTTGGAGGCATTGCGTGAACCCCTAGA
GAACGGCCACATCACCATCTCACGGGCGGCCACGCAGGCGAAGTTCCCAGCACGGTTTCAGCTGATCGCCGCGATGAACC
CCTGCCCATGTGGTTACTTAGGCTCTTCCGTCAAAGCCTGCCGCTGCACGCCTGACCAAGTGACGCGTTACCAAGGCAAG
CTGAGCGGACCGTTGCTAGACCGCATTGATTTGCAAGTGGAAGTGCCGACCCTGACTGCTGATGTGTTGATGCAGACAGC
ACCCGGTGAGTCCACGGCCACGGTACGTGCGCGATGCCTAGCCGCACACGCCAAAGCCATAGCGCGACAAGACGTACCCA
ACCAAGCCCTGCAAGGCCAAGCTTTAGAAGCGCACATGCAGCTAGACGCAGCAGCGGCCACGTTTTTGCAAAACGCAGCC
ACCAAACTGGGCTGGTCCAGCCGCAGCACACACCGTGCGATACGCGTGGCACGCACCATTGCAGACCTGGCCGGCAGCAC
CGCTATACAAGTGGCACATGTGGCCGAGGCGCTGCAATACCGTCGCGTGCTGACTTAA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-140)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (429-521)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (218-420)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	51.145	99.81	0.51
comM	Haemophilus influenzae Rd KW20	50.763	99.81	0.507
comM	Glaesserella parasuis strain SC1401	49.905	100	0.499
comM	Vibrio campbellii strain DS40M4	49.809	99.81	0.497
comM	Legionella pneumophila str. Paris	46.869	100	0.47
comM	Legionella pneumophila strain ERS1305867	46.869	100	0.47
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	41.21	100	0.415