Detailed information NTG0990714

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACNRMP_RS13000
• Genome accession: NZ_JBLWDC010000001
• Coordinates: 2812910..2814442 (-)
• Length: 510 a.a.
• NCBI ID: WP_028852548.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain PD 7123
• Function: promote branch migration; interact with DprA; integration of tDNA (predicted from homology) Homologous recombination

Genomic Context

Location: 2807910..2819442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNRMP_RS12975 (ACNRMP_12975)	-	2808781..2809332 (-)	552	WP_028852544.1	TlpA disulfide reductase family protein	-
ACNRMP_RS12980 (ACNRMP_12980)	-	2809436..2809951 (-)	516	WP_016724225.1	O-acetyl-ADP-ribose deacetylase	-
ACNRMP_RS12985 (ACNRMP_12985)	-	2810051..2810611 (+)	561	WP_028852545.1	hypothetical protein	-
ACNRMP_RS12990 (ACNRMP_12990)	-	2810753..2811229 (-)	477	WP_028852546.1	hypothetical protein	-
ACNRMP_RS12995 (ACNRMP_12995)	-	2811276..2812766 (-)	1491	WP_028852547.1	tyrosinase family protein	-
ACNRMP_RS13000 (ACNRMP_13000)	comM	2812910..2814442 (-)	1533	WP_028852548.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
ACNRMP_RS13005 (ACNRMP_13005)	-	2814652..2815167 (-)	516	WP_011000303.1	hypothetical protein	-
ACNRMP_RS13010 (ACNRMP_13010)	-	2815447..2815710 (-)	264	WP_011000304.1	accessory factor UbiK family protein	-
ACNRMP_RS13015 (ACNRMP_13015)	-	2816261..2817067 (+)	807	WP_016724231.1	TorF family putative porin	-
ACNRMP_RS13020 (ACNRMP_13020)	-	2817115..2817453 (+)	339	WP_028852549.1	P-II family nitrogen regulator	-
ACNRMP_RS13025 (ACNRMP_13025)	-	2817486..2819033 (+)	1548	WP_197377815.1	ammonium transporter	-

Sequence

Protein

• Length: 510 a.a.
• Molecular weight: 54597.29 Da
• Isoelectric Point: 7.4239

>NTDB_id=990714 ACNRMP_RS13000 WP_028852548.1 2812910..2814442(-) (comM) [Ralstonia pseudosolanacearum strain PD 7123]
MSLAVLRSRALAGIDAPAVSVEVHLANGLPSFTIVGLPDTEVKESKDRVRAAIQNSRFEFPARRITVNLAPADLPKESGR
FDLPIALGILAASRQIPHTHLDAHEFAGELSLSGDLRPIRGALAMAYALSRQPGPPDGDEPRPRAFVLPTENAAEAALVS
GTRVLPAHTLSEVCDHLSTPDRKLAPAVPAPIGASVHYPDLADVRGQPQARRALEVAAAGGHSMLMIGPPGTGKSMLAQR
FPGLLPDMSDDEALSAAAVMSLTTRGFDAQRWKVRPFRAPHHTASAVAMVGGGNTPRPGEISLAHQGVLFLDELPEFERR
VLEVLREPLETGHITISRAAHQTDFPASFQLIAAMNPCPCGYLGHPLRACRCTPDQVERYQARLSGPLLDRIDVQIEVPT
PSQEELLDGPPGEPTAAVAARVAAAHARQRARQGKRNALLAGHEIDLHCTRTDAADSLLRQAMTRFSWSARAYARVLKLA
RTIADLAGDAAVDTAHVGEAIQYRRGVKAD

Nucleotide

• Length: 1533 bp

>NTDB_id=990714 ACNRMP_RS13000 WP_028852548.1 2812910..2814442(-) (comM) [Ralstonia pseudosolanacearum strain PD 7123]
ATGAGTCTTGCCGTCCTGCGTTCACGGGCGCTGGCCGGCATCGACGCGCCGGCGGTATCGGTGGAGGTGCACCTGGCCAA
CGGACTGCCCTCCTTCACCATCGTCGGTCTGCCGGACACGGAGGTGAAGGAAAGCAAGGACCGCGTGCGCGCGGCCATCC
AGAACAGCCGCTTCGAGTTTCCCGCGCGGCGCATCACCGTCAACCTGGCGCCGGCCGATCTGCCGAAAGAGTCGGGCCGC
TTCGACCTGCCGATCGCCCTGGGCATCCTCGCCGCCAGCCGGCAGATTCCGCACACGCACCTGGACGCGCACGAGTTTGC
GGGAGAGCTGTCGCTGTCGGGCGACCTGCGGCCGATCCGTGGCGCGCTGGCCATGGCATATGCGCTGTCGCGCCAGCCGG
GGCCGCCCGATGGCGATGAGCCGCGCCCTCGCGCCTTTGTCCTGCCCACCGAGAATGCCGCCGAGGCGGCGCTGGTCAGC
GGCACCCGGGTACTGCCGGCGCACACGCTGAGCGAGGTCTGCGACCATCTGTCCACGCCCGACCGCAAGCTGGCGCCCGC
CGTGCCCGCCCCAATCGGCGCCAGCGTCCACTATCCCGACCTGGCCGACGTACGCGGCCAGCCTCAGGCGCGCCGCGCCC
TGGAAGTGGCGGCGGCCGGTGGCCACTCGATGCTGATGATCGGTCCGCCCGGCACCGGCAAGTCCATGCTGGCCCAGCGC
TTTCCCGGCTTGCTGCCCGACATGAGCGACGACGAGGCGCTCTCCGCTGCCGCGGTGATGAGCCTGACCACGCGCGGTTT
CGATGCGCAGCGCTGGAAGGTGCGTCCGTTCCGCGCGCCGCATCACACGGCGTCGGCGGTGGCGATGGTGGGAGGCGGCA
ACACGCCGCGGCCGGGCGAGATTTCGCTGGCGCATCAGGGCGTACTGTTCCTCGATGAATTGCCCGAATTCGAGCGCCGC
GTGCTGGAGGTCCTGCGGGAGCCGCTGGAAACCGGCCACATCACCATCTCCCGCGCGGCGCACCAGACGGATTTTCCCGC
CAGTTTCCAGCTGATCGCGGCCATGAATCCGTGCCCGTGCGGCTATCTCGGGCATCCATTGCGCGCGTGCCGGTGCACGC
CGGACCAGGTGGAGCGCTATCAGGCCCGCCTCTCCGGCCCGCTGCTCGATCGCATCGACGTGCAGATCGAGGTGCCGACA
CCATCGCAGGAGGAATTGCTCGATGGTCCGCCCGGCGAGCCGACCGCCGCCGTGGCCGCGCGCGTGGCGGCGGCGCATGC
ACGGCAACGGGCGCGCCAGGGCAAACGCAACGCACTGCTGGCCGGGCACGAGATCGATCTGCATTGCACGCGCACCGACG
CTGCCGACAGCCTGCTGCGCCAGGCGATGACGCGCTTCTCGTGGTCGGCCCGCGCCTATGCGCGCGTGCTCAAGCTCGCC
CGCACCATCGCCGACCTGGCGGGCGACGCGGCTGTCGATACGGCGCACGTTGGCGAAGCCATCCAATACCGGCGCGGCGT
GAAAGCAGACTGA

Domains

Predicted by InterProScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (200-405)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (412-504)

• Subunit ChlI of Mg-chelatase (ChlI) (21-131)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae O1 biovar El Tor strain E7946	53.755	99.216	0.533
comM	Vibrio cholerae strain A1552	53.755	99.216	0.533
comM	Vibrio campbellii strain DS40M4	52.673	99.02	0.522
comM	Legionella pneumophila str. Paris	51.176	100	0.512
comM	Legionella pneumophila strain ERS1305867	51.176	100	0.512
comM	Glaesserella parasuis strain SC1401	51.081	99.804	0.51
comM	Haemophilus influenzae Rd KW20	49.903	100	0.504
comM	Acinetobacter baylyi ADP1	49.703	99.02	0.492
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	41.942	100	0.424