Detailed information NTG0986628

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHI16_RS16400
• Genome accession: NZ_CP152044
• Coordinates: 3183625..3184311 (-)
• Length: 228 a.a.
• NCBI ID: WP_208856849.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-0923
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3178625..3189311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHI16_RS16365 (MHI16_16365)	fliW	3178759..3179193 (-)	435	WP_342498013.1	flagellar assembly protein FliW	-
MHI16_RS16370 (MHI16_16370)	-	3179221..3179799 (-)	579	WP_012011425.1	DUF6470 family protein	-
MHI16_RS16375 (MHI16_16375)	flgL	3179848..3180759 (-)	912	WP_061409756.1	flagellar hook-associated protein FlgL	-
MHI16_RS16380 (MHI16_16380)	flgK	3180769..3182289 (-)	1521	WP_061409758.1	flagellar hook-associated protein FlgK	-
MHI16_RS16385 (MHI16_16385)	-	3182305..3182787 (-)	483	WP_034660146.1	flagellar protein FlgN	-
MHI16_RS16390 (MHI16_16390)	flgM	3182806..3183069 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHI16_RS16395 (MHI16_16395)	-	3183149..3183568 (-)	420	WP_034660147.1	TIGR03826 family flagellar region protein	-
MHI16_RS16400 (MHI16_16400)	comFC	3183625..3184311 (-)	687	WP_208856849.1	ComF family protein	Machinery gene
MHI16_RS16405 (MHI16_16405)	-	3184308..3184601 (-)	294	WP_061409760.1	competence protein ComFB	-
MHI16_RS16410 (MHI16_16410)	comFA	3184668..3186047 (-)	1380	WP_342498014.1	DEAD/DEAH box helicase	Machinery gene
MHI16_RS16415 (MHI16_16415)	-	3186167..3187009 (-)	843	WP_058013557.1	DegV family protein	-
MHI16_RS16420 (MHI16_16420)	degU	3187227..3187916 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHI16_RS16425 (MHI16_16425)	degS	3187981..3189156 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26047.40 Da
• Isoelectric Point: 9.9625

>NTDB_id=986628 MHI16_RS16400 WP_208856849.1 3183625..3184311(-) (comFC) [Bacillus sp. FSL K6-0923]
MICLICEGHFVASFTWKSLLLLNDNRLCIACKHRLEKIQRPICPACGRAQSNDQLCQDCSRWKERLDSTTVLVKNRSVYA
YNDLMKDVLSRFKFRGDTALAELFKQDVQAIFKRSFSIKEPVLIPIPLSKERLNERGFNQSVILASLIGQPIQQPLVKIH
QSKQSKKKKNERLDQKGMFQINQTDVIVQRDVILIDDIYTTGATIYDAARILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=986628 MHI16_RS16400 WP_208856849.1 3183625..3184311(-) (comFC) [Bacillus sp. FSL K6-0923]
TTGATCTGCCTAATTTGTGAGGGGCATTTTGTCGCTTCTTTTACATGGAAATCATTACTTCTATTAAATGATAATCGTCT
ATGTATAGCATGTAAGCATCGCCTAGAAAAAATTCAACGCCCGATTTGTCCAGCCTGTGGGAGAGCGCAGTCGAATGATC
AATTATGTCAAGACTGTTCCAGGTGGAAAGAACGCCTTGATTCTACTACAGTACTTGTGAAAAATAGGTCTGTCTATGCT
TACAACGATTTGATGAAAGATGTCCTTTCCCGCTTTAAATTTCGAGGTGATACAGCATTAGCTGAGCTTTTTAAACAAGA
TGTCCAAGCGATATTTAAGCGTTCCTTTTCAATTAAAGAACCTGTACTAATCCCGATTCCTTTAAGTAAAGAAAGACTAA
ATGAAAGAGGGTTTAATCAGTCCGTTATACTTGCTTCCTTGATTGGTCAGCCGATCCAGCAGCCTCTTGTGAAAATACAT
CAAAGCAAACAGTCCAAGAAAAAGAAAAATGAACGTTTAGATCAAAAAGGAATGTTTCAAATCAATCAGACAGATGTGAT
CGTTCAAAGGGATGTTATCTTAATTGACGATATTTATACAACAGGGGCCACCATTTATGATGCGGCGAGAATTTTAAAAG
AAGCAGGTGCCAAAAGTGTTTCCTCATTTACGTTGATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (136-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	39.565	100	0.399
comFC/cflB	Streptococcus mitis NCTC 12261	38.696	100	0.39
comFC/cflB	Streptococcus pneumoniae TIGR4	38.261	100	0.386
comFC/cflB	Streptococcus pneumoniae Rx1	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae D39	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae R6	37.991	100	0.382