Detailed information NTG0985813

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHH54_RS16255
• Genome accession: NZ_CP152030
• Coordinates: 3181242..3181928 (-)
• Length: 228 a.a.
• NCBI ID: WP_003212791.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-4563
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3176242..3186928

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHH54_RS16220 (MHH54_16220)	fliW	3176375..3176809 (-)	435	WP_050944340.1	flagellar assembly protein FliW	-
MHH54_RS16225 (MHH54_16225)	-	3176838..3177416 (-)	579	WP_342500430.1	DUF6470 family protein	-
MHH54_RS16230 (MHH54_16230)	flgL	3177465..3178376 (-)	912	WP_003213719.1	flagellar hook-associated protein FlgL	-
MHH54_RS16235 (MHH54_16235)	flgK	3178386..3179906 (-)	1521	WP_003213544.1	flagellar hook-associated protein FlgK	-
MHH54_RS16240 (MHH54_16240)	-	3179922..3180404 (-)	483	WP_113387415.1	flagellar protein FlgN	-
MHH54_RS16245 (MHH54_16245)	flgM	3180423..3180686 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHH54_RS16250 (MHH54_16250)	-	3180766..3181185 (-)	420	WP_003212865.1	TIGR03826 family flagellar region protein	-
MHH54_RS16255 (MHH54_16255)	comFC	3181242..3181928 (-)	687	WP_003212791.1	ComF family protein	Machinery gene
MHH54_RS16260 (MHH54_16260)	-	3181925..3182218 (-)	294	WP_003213271.1	competence protein ComFB	-
MHH54_RS16265 (MHH54_16265)	comFA	3182285..3183664 (-)	1380	WP_269457875.1	DEAD/DEAH box helicase	Machinery gene
MHH54_RS16270 (MHH54_16270)	-	3183784..3184626 (-)	843	WP_003213402.1	DegV family protein	-
MHH54_RS16275 (MHH54_16275)	degU	3184844..3185533 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHH54_RS16280 (MHH54_16280)	degS	3185598..3186773 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 25993.42 Da
• Isoelectric Point: 9.6636

>NTDB_id=985813 MHH54_RS16255 WP_003212791.1 3181242..3181928(-) (comFC) [Bacillus sp. FSL K6-4563]
MICLICEGHFVASFTWKSLLLLNDDRLCIACKHHLEKIQRPICPACGRAQSNDQLCQDCSMWKERPDSTTVLVKNRSVYA
YNDLMKDVLSRFKFRGDTALAELFKQDVRAVFKRSFSMKEPVLIPIPLSKERLKERGFNQSVILASLIGEPILQPLVKIH
QSKQSKKKKNERLDQKGMFQITQTDAIVQREVILIDDIYTTGATIYDAARILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=985813 MHH54_RS16255 WP_003212791.1 3181242..3181928(-) (comFC) [Bacillus sp. FSL K6-4563]
TTGATCTGCCTCATTTGTGAGGGACATTTTGTCGCTTCTTTTACATGGAAATCATTACTTCTATTAAATGATGATCGTCT
ATGTATAGCATGTAAGCATCACCTAGAAAAAATTCAACGCCCGATTTGTCCAGCCTGCGGGAGAGCACAGTCGAACGATC
AATTATGTCAAGACTGTTCCATGTGGAAAGAACGCCCTGATTCTACTACAGTACTTGTGAAAAATAGGTCTGTCTATGCT
TACAACGATTTGATGAAAGATGTCCTTTCCCGCTTTAAATTTCGAGGTGATACAGCTTTAGCTGAGCTTTTTAAACAAGA
TGTCCGAGCAGTATTTAAGCGCTCTTTTTCAATGAAAGAACCTGTCCTGATCCCGATTCCTTTAAGTAAAGAAAGACTAA
AGGAAAGAGGGTTTAATCAGTCCGTCATACTTGCTTCCTTGATTGGTGAGCCGATCCTTCAGCCACTTGTAAAAATACAT
CAAAGCAAACAGTCCAAGAAAAAGAAAAATGAACGTTTAGATCAAAAAGGAATGTTTCAAATCACGCAGACAGATGCGAT
CGTTCAAAGGGAAGTTATCTTAATTGACGACATTTATACAACAGGGGCCACCATTTATGATGCGGCGAGAATTTTAAAAG
AAGCAGGTGCCAAAAGTGTTTCCTCTTTTACGTTGATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (136-226)

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50	100	0.504
comFC/cflB	Streptococcus mitis NCTC 12261	38.865	100	0.39
comFC/cflB	Streptococcus mitis SK321	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae Rx1	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae D39	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae R6	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae TIGR4	38.865	100	0.39