Detailed information NTG0985051

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MKY83_RS16950
• Genome accession: NZ_CP152015
• Coordinates: 3274817..3275503 (-)
• Length: 228 a.a.
• NCBI ID: WP_181462031.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL M8-0266
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3269817..3280503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKY83_RS16915 (MKY83_16915)	fliW	3269950..3270384 (-)	435	WP_044139341.1	flagellar assembly protein FliW	-
MKY83_RS16920 (MKY83_16920)	-	3270413..3270991 (-)	579	WP_003213106.1	DUF6470 family protein	-
MKY83_RS16925 (MKY83_16925)	flgL	3271040..3271951 (-)	912	WP_044139340.1	flagellar hook-associated protein FlgL	-
MKY83_RS16930 (MKY83_16930)	flgK	3271961..3273481 (-)	1521	WP_044139339.1	flagellar hook-associated protein FlgK	-
MKY83_RS16935 (MKY83_16935)	-	3273497..3273979 (-)	483	WP_034660146.1	flagellar protein FlgN	-
MKY83_RS16940 (MKY83_16940)	flgM	3273998..3274261 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
MKY83_RS16945 (MKY83_16945)	-	3274341..3274760 (-)	420	WP_044139338.1	TIGR03826 family flagellar region protein	-
MKY83_RS16950 (MKY83_16950)	comFC	3274817..3275503 (-)	687	WP_181462031.1	ComF family protein	Machinery gene
MKY83_RS16955 (MKY83_16955)	-	3275500..3275793 (-)	294	WP_044139337.1	competence protein ComFB	-
MKY83_RS16960 (MKY83_16960)	comFA	3275860..3277239 (-)	1380	WP_142671660.1	DEAD/DEAH box helicase	Machinery gene
MKY83_RS16965 (MKY83_16965)	-	3277359..3278201 (-)	843	WP_044139336.1	DegV family protein	-
MKY83_RS16970 (MKY83_16970)	degU	3278419..3279108 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MKY83_RS16975 (MKY83_16975)	degS	3279173..3280348 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26014.45 Da
• Isoelectric Point: 9.8032

>NTDB_id=985051 MKY83_RS16950 WP_181462031.1 3274817..3275503(-) (comFC) [Bacillus sp. FSL M8-0266]
MICLICEGHFVASFTWKSLLLLNDDRLCIACKHHLEKIQRPICPACGRAQSSDQLCQDCSRWKERPDSTSLLVKNRSVYA
YNDLMKEVLSRFKFRGDTALAELFKQDVQVVFKRSFSIKEPVLIPIPLSKERLKERGFNQSVILASLIGEPILQPLVKIH
QTKQSKKKKNERLDQKGMFQIKQTDAIVQRDVILIDDIYTTGATIYDAARILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=985051 MKY83_RS16950 WP_181462031.1 3274817..3275503(-) (comFC) [Bacillus sp. FSL M8-0266]
TTGATCTGCCTCATTTGTGAGGGGCATTTTGTCGCTTCTTTTACATGGAAATCATTACTTCTATTAAATGATGATCGTCT
ATGTATAGCATGTAAGCATCACCTAGAAAAAATTCAACGCCCGATTTGTCCAGCCTGCGGGAGAGCACAGTCGAGCGATC
AATTATGTCAAGACTGTTCCAGGTGGAAAGAACGCCCTGATTCTACTTCATTACTTGTGAAAAATAGGTCTGTCTATGCT
TACAACGATTTGATGAAAGAGGTCCTTTCCCGCTTTAAATTTCGAGGTGATACAGCTTTAGCTGAGCTTTTTAAACAAGA
TGTCCAAGTAGTATTTAAGCGCTCTTTTTCAATTAAAGAACCTGTGCTGATCCCGATTCCTTTAAGTAAAGAAAGACTAA
AGGAAAGAGGGTTTAATCAGTCCGTCATACTTGCTTCCTTGATTGGTGAGCCGATCCTTCAGCCACTTGTGAAAATACAT
CAAACCAAACAGTCCAAGAAAAAGAAAAATGAACGTTTAGATCAAAAAGGAATGTTTCAAATCAAACAGACAGATGCGAT
CGTTCAAAGGGATGTTATCTTAATTGACGACATTTATACAACAGGGGCCACCATTTATGATGCGGCGAGAATTTTAAAAG
AAGCAGGTGCCAAAAGTGTTTCCTCTTTTACGTTGATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (142-226)

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	51.304	100	0.518
comFC/cflB	Streptococcus mitis SK321	39.565	100	0.399
comFC/cflB	Streptococcus pneumoniae D39	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae R6	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae TIGR4	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae Rx1	38.865	100	0.39
comFC/cflB	Streptococcus mitis NCTC 12261	38.865	100	0.39