Detailed information NTG0984837

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: NYE68_RS13870
• Genome accession: NZ_CP152012
• Coordinates: 2785953..2786567 (-)
• Length: 204 a.a.
• NCBI ID: WP_053573180.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R5-0447
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2780953..2791567

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE68_RS13840 (NYE68_13840)	rpsT	2781256..2781522 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
NYE68_RS13845 (NYE68_13845)	holA	2781539..2782580 (-)	1042	Protein_2684	DNA polymerase III subunit delta	-
NYE68_RS13850 (NYE68_13850)	-	2782620..2782771 (-)	152	Protein_2685	hypothetical protein	-
NYE68_RS13855 (NYE68_13855)	-	2782812..2782946 (+)	135	WP_003152870.1	YqzM family protein	-
NYE68_RS13860 (NYE68_13860)	comEC	2782965..2785316 (-)	2352	WP_324636680.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NYE68_RS13865 (NYE68_13865)	-	2785317..2785886 (-)	570	WP_003152868.1	ComE operon protein 2	-
NYE68_RS13870 (NYE68_13870)	comEA	2785953..2786567 (-)	615	WP_053573180.1	helix-hairpin-helix domain-containing protein	Machinery gene
NYE68_RS13875 (NYE68_13875)	comER	2786626..2787447 (+)	822	WP_015417855.1	late competence protein ComER	-
NYE68_RS13880 (NYE68_13880)	-	2787516..2788253 (-)	738	WP_015417856.1	class I SAM-dependent methyltransferase	-
NYE68_RS13885 (NYE68_13885)	rsfS	2788250..2788606 (-)	357	WP_007408260.1	ribosome silencing factor	-
NYE68_RS13890 (NYE68_13890)	yqeK	2788624..2789184 (-)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
NYE68_RS13895 (NYE68_13895)	-	2789174..2789743 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
NYE68_RS13900 (NYE68_13900)	yhbY	2789754..2790044 (-)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-
NYE68_RS13905 (NYE68_13905)	aroE	2790038..2790880 (-)	843	WP_324636675.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22183.34 Da
• Isoelectric Point: 6.4888

>NTDB_id=984837 NYE68_RS13870 WP_053573180.1 2785953..2786567(-) (comEA) [Bacillus sp. FSL R5-0447]
MTKAMMTERLRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTAADKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTMVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=984837 NYE68_RS13870 WP_053573180.1 2785953..2786567(-) (comEA) [Bacillus sp. FSL R5-0447]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGCATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCCGTGCTCGGCCAAACAGCCTCAGCAT
CCGTTGCGGACAAAAAAGACACCGCAGCCGATAAGATTATGATTGATGTGAAAGGTGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGAGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATGGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CGGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (68-122)

• Helix-hairpin-helix motif (HHH_3) (141-202)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.854	94.118	0.554
comEA	Latilactobacillus sakei subsp. sakei 23K	32.328	100	0.368
comEA/celA/cilE	Streptococcus mitis NCTC 12261	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae Rx1	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae D39	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae R6	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.545	100	0.368
comEA/celA/cilE	Streptococcus mitis SK321	35.071	100	0.363