Detailed information NTG0984705

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MKY18_RS16200
• Genome accession: NZ_CP152010
• Coordinates: 3172603..3173289 (-)
• Length: 228 a.a.
• NCBI ID: WP_181462031.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R7-0672
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3167603..3178289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKY18_RS16165 (MKY18_16165)	fliW	3167736..3168170 (-)	435	WP_044139341.1	flagellar assembly protein FliW	-
MKY18_RS16170 (MKY18_16170)	-	3168199..3168777 (-)	579	WP_342497578.1	DUF6470 family protein	-
MKY18_RS16175 (MKY18_16175)	flgL	3168826..3169737 (-)	912	WP_044139340.1	flagellar hook-associated protein FlgL	-
MKY18_RS16180 (MKY18_16180)	flgK	3169747..3171267 (-)	1521	WP_044139339.1	flagellar hook-associated protein FlgK	-
MKY18_RS16185 (MKY18_16185)	-	3171283..3171765 (-)	483	WP_034660146.1	flagellar protein FlgN	-
MKY18_RS16190 (MKY18_16190)	flgM	3171784..3172047 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
MKY18_RS16195 (MKY18_16195)	-	3172127..3172546 (-)	420	WP_044139338.1	TIGR03826 family flagellar region protein	-
MKY18_RS16200 (MKY18_16200)	comFC	3172603..3173289 (-)	687	WP_181462031.1	ComF family protein	Machinery gene
MKY18_RS16205 (MKY18_16205)	-	3173286..3173579 (-)	294	WP_044139337.1	competence protein ComFB	-
MKY18_RS16210 (MKY18_16210)	comFA	3173646..3175025 (-)	1380	WP_342497579.1	DEAD/DEAH box helicase	Machinery gene
MKY18_RS16215 (MKY18_16215)	-	3175145..3175987 (-)	843	WP_044139336.1	DegV family protein	-
MKY18_RS16220 (MKY18_16220)	degU	3176205..3176894 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MKY18_RS16225 (MKY18_16225)	degS	3176959..3178134 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26014.45 Da
• Isoelectric Point: 9.8032

>NTDB_id=984705 MKY18_RS16200 WP_181462031.1 3172603..3173289(-) (comFC) [Bacillus sp. FSL R7-0672]
MICLICEGHFVASFTWKSLLLLNDDRLCIACKHHLEKIQRPICPACGRAQSSDQLCQDCSRWKERPDSTSLLVKNRSVYA
YNDLMKEVLSRFKFRGDTALAELFKQDVQVVFKRSFSIKEPVLIPIPLSKERLKERGFNQSVILASLIGEPILQPLVKIH
QTKQSKKKKNERLDQKGMFQIKQTDAIVQRDVILIDDIYTTGATIYDAARILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=984705 MKY18_RS16200 WP_181462031.1 3172603..3173289(-) (comFC) [Bacillus sp. FSL R7-0672]
TTGATCTGCCTCATTTGTGAGGGGCATTTTGTCGCTTCTTTTACATGGAAATCATTACTTCTATTAAATGATGATCGTCT
ATGTATAGCATGTAAGCATCACCTAGAAAAAATTCAACGCCCGATTTGTCCAGCCTGCGGGAGAGCACAGTCGAGCGATC
AATTATGTCAAGACTGTTCCAGGTGGAAAGAACGCCCTGATTCTACTTCATTACTTGTGAAAAATAGGTCTGTCTATGCT
TACAACGATTTGATGAAAGAGGTCCTTTCCCGCTTTAAATTTCGAGGTGATACAGCTTTAGCTGAGCTTTTTAAACAAGA
TGTCCAAGTAGTATTTAAGCGCTCTTTTTCAATTAAAGAACCTGTGCTGATCCCGATTCCTTTAAGTAAAGAAAGACTAA
AGGAAAGAGGGTTTAATCAGTCCGTCATACTTGCTTCCTTGATTGGTGAGCCGATCCTTCAGCCACTTGTGAAAATACAT
CAAACCAAACAGTCCAAGAAAAAGAAAAATGAACGTTTAGATCAAAAAGGAATGTTTCAAATCAAACAGACAGATGCGAT
CGTTCAAAGGGATGTTATCTTAATTGACGACATTTATACAACAGGGGCCACCATTTATGATGCGGCGAGAATTTTAAAAG
AAGCAGGTGCCAAAAGTGTTTCCTCTTTTACGTTGATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (142-226)

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	51.304	100	0.518
comFC/cflB	Streptococcus mitis SK321	39.565	100	0.399
comFC/cflB	Streptococcus pneumoniae D39	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae R6	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae TIGR4	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae Rx1	38.865	100	0.39
comFC/cflB	Streptococcus mitis NCTC 12261	38.865	100	0.39