Detailed information NTG0983883

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NST15_RS16465
• Genome accession: NZ_CP151991
• Coordinates: 3173226..3173807 (-)
• Length: 193 a.a.
• NCBI ID: WP_227820606.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R5-0820
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3168226..3178807

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NST15_RS16430 (NST15_16430)	fliW	3168362..3168796 (-)	435	WP_007499985.1	flagellar assembly protein FliW	-
NST15_RS16435 (NST15_16435)	-	3168825..3169403 (-)	579	WP_035701576.1	DUF6470 family protein	-
NST15_RS16440 (NST15_16440)	flgL	3169450..3170361 (-)	912	WP_017368141.1	flagellar hook-associated protein FlgL	-
NST15_RS16445 (NST15_16445)	flgK	3170370..3171890 (-)	1521	WP_017368142.1	flagellar hook-associated protein FlgK	-
NST15_RS16450 (NST15_16450)	-	3171906..3172388 (-)	483	WP_007499977.1	flagellar protein FlgN	-
NST15_RS16455 (NST15_16455)	flgM	3172407..3172670 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
NST15_RS16460 (NST15_16460)	-	3172750..3173169 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
NST15_RS16465 (NST15_16465)	comFC	3173226..3173807 (-)	582	WP_227820606.1	ComF family protein	Machinery gene
NST15_RS16470 (NST15_16470)	-	3173909..3174202 (-)	294	WP_035701582.1	competence protein ComFB	-
NST15_RS16475 (NST15_16475)	comFA	3174267..3175646 (-)	1380	WP_342499065.1	DEAD/DEAH box helicase	Machinery gene
NST15_RS16480 (NST15_16480)	-	3175766..3176608 (-)	843	WP_024719242.1	DegV family protein	-
NST15_RS16485 (NST15_16485)	degU	3176820..3177509 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NST15_RS16490 (NST15_16490)	degS	3177574..3178749 (-)	1176	WP_035389673.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 22065.88 Da
• Isoelectric Point: 10.6068

>NTDB_id=983883 NST15_RS16465 WP_227820606.1 3173226..3173807(-) (comFC) [Bacillus sp. FSL R5-0820]
MKIQCPTCPKCGRAQLNDQLCQDCSRWNKRRDFAEILVMNRSVYAYNDFMKDILARFKFRGDTALADLFKKDVQSAFKRS
FSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVHQSKQSKKRKNERLHQQNLFQLRQSNPIVLKDVVLI
DDIYTTGATVYHAAKILKGAGAKSVSSFTLIRS

Nucleotide

• Length: 582 bp

>NTDB_id=983883 NST15_RS16465 WP_227820606.1 3173226..3173807(-) (comFC) [Bacillus sp. FSL R5-0820]
ATGAAGATTCAATGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATTAAATGATCAATTGTGTCAGGATTGTTCAAGGTG
GAATAAACGACGGGATTTTGCTGAGATTCTTGTGATGAATCGATCTGTTTATGCTTACAACGACTTTATGAAAGATATTC
TAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGATGTACAGTCAGCGTTTAAACGTTCT
TTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAAAGGAAAGAGGATTCAATCAGTCAAT
GATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACATCAAAGTAAGCAGTCTAAGAAAAGAA
AAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGATCGTTCTAAAGGATGTCGTATTAATC
GATGACATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAGGAGCAGGCGCCAAAAGTGTTTCCTC
TTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (126-191)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.259	100	0.503
comFC/cflB	Streptococcus mitis SK321	40	95.855	0.383
comFC/cflB	Streptococcus mitis NCTC 12261	39.459	95.855	0.378
comFC/cflB	Streptococcus pneumoniae TIGR4	38.919	95.855	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	38.919	95.855	0.373
comFC/cflB	Streptococcus pneumoniae D39	38.919	95.855	0.373
comFC/cflB	Streptococcus pneumoniae R6	38.919	95.855	0.373