Detailed information NTG0983884

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: NST15_RS16475
• Genome accession: NZ_CP151991
• Coordinates: 3174267..3175646 (-)
• Length: 459 a.a.
• NCBI ID: WP_342499065.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R5-0820
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3169267..3180646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NST15_RS16440 (NST15_16440)	flgL	3169450..3170361 (-)	912	WP_017368141.1	flagellar hook-associated protein FlgL	-
NST15_RS16445 (NST15_16445)	flgK	3170370..3171890 (-)	1521	WP_017368142.1	flagellar hook-associated protein FlgK	-
NST15_RS16450 (NST15_16450)	-	3171906..3172388 (-)	483	WP_007499977.1	flagellar protein FlgN	-
NST15_RS16455 (NST15_16455)	flgM	3172407..3172670 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
NST15_RS16460 (NST15_16460)	-	3172750..3173169 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
NST15_RS16465 (NST15_16465)	comFC	3173226..3173807 (-)	582	WP_227820606.1	ComF family protein	Machinery gene
NST15_RS16470 (NST15_16470)	-	3173909..3174202 (-)	294	WP_035701582.1	competence protein ComFB	-
NST15_RS16475 (NST15_16475)	comFA	3174267..3175646 (-)	1380	WP_342499065.1	DEAD/DEAH box helicase	Machinery gene
NST15_RS16480 (NST15_16480)	-	3175766..3176608 (-)	843	WP_024719242.1	DegV family protein	-
NST15_RS16485 (NST15_16485)	degU	3176820..3177509 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NST15_RS16490 (NST15_16490)	degS	3177574..3178749 (-)	1176	WP_035389673.1	sensor histidine kinase	Regulator
NST15_RS16495 (NST15_16495)	-	3178971..3179639 (+)	669	WP_017357860.1	YigZ family protein	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 52412.16 Da
• Isoelectric Point: 9.9106

>NTDB_id=983884 NST15_RS16475 WP_342499065.1 3174267..3175646(-) (comFA) [Bacillus sp. FSL R5-0820]
MNLEKAMELSHKLQSRHLLPIECQCTQSELEWLENQGLIHRTPAVNRVAGGLICCRCGVSNKRYFALSPCETCKKDCVYC
RSCIMLGKVSECGFLYEWTGPQKKETRQVELTWQGELSKGQKRASDRLVEAIQNKFDLLVWAVCGAGKTEVLFHGIKYAL
NNGMSVCIATPRTDVVLELEPRMRKAFQGLNIAALYGGSSQRFQMAPLMIATTHQLMRYKNAFDVLIVDEVDAFPYSMDE
RLQFAVLKSMKKTGVRIYLSATPSKKMQKDVACRQLEAIKIPLRFHQKPLPVPTFQWVGDWKKKLKRNRLPASTMNWLHE
HITKKKRVLLFVPSISTMKKVTHILQVQCVNVQGVSADDQERKQKVQHFRDHRYDVLVTTTILERGVTIQDVQVGVLGAE
SPIFTESALVQISGRAGRHPDFFNGDVYFFHFGLTRSMKQAKKHIVKMNNTAEKEFSEK

Nucleotide

• Length: 1380 bp

>NTDB_id=983884 NST15_RS16475 WP_342499065.1 3174267..3175646(-) (comFA) [Bacillus sp. FSL R5-0820]
TTGAATCTGGAAAAAGCAATGGAACTCAGTCACAAGCTACAATCAAGGCATCTTCTTCCTATTGAATGTCAATGTACACA
GTCCGAATTGGAGTGGCTGGAGAATCAAGGATTGATCCATAGAACACCTGCTGTCAATAGGGTGGCGGGTGGTTTGATCT
GCTGCCGGTGCGGTGTATCAAACAAGCGCTACTTTGCCCTCTCTCCGTGTGAAACATGTAAAAAAGACTGTGTATACTGT
AGATCCTGCATCATGCTGGGAAAAGTAAGTGAATGTGGCTTTCTCTATGAATGGACGGGTCCACAAAAGAAAGAAACAAG
ACAAGTTGAATTAACATGGCAGGGAGAACTTTCTAAAGGGCAAAAGAGAGCGTCCGATAGGCTAGTAGAAGCAATCCAAA
ACAAATTTGATCTGCTCGTTTGGGCTGTTTGTGGTGCGGGGAAAACGGAGGTGCTTTTTCACGGAATAAAATATGCGCTA
AATAACGGAATGAGTGTTTGTATTGCGACGCCTAGAACCGATGTTGTACTTGAGCTTGAACCTCGAATGAGAAAGGCATT
TCAAGGACTGAATATAGCTGCACTTTATGGCGGGAGTTCTCAAAGATTTCAAATGGCACCGCTTATGATCGCTACAACCC
ATCAGCTAATGAGATATAAAAACGCTTTTGATGTCCTCATTGTAGACGAAGTCGATGCTTTTCCTTATTCAATGGATGAA
CGGCTTCAGTTTGCTGTTTTAAAGTCAATGAAAAAAACAGGAGTTAGAATTTACTTAAGTGCCACACCATCTAAAAAAAT
GCAAAAGGATGTTGCTTGTAGACAATTAGAAGCGATCAAAATTCCTCTGCGCTTCCACCAAAAACCGCTGCCTGTCCCAA
CATTTCAATGGGTTGGAGATTGGAAAAAGAAATTAAAAAGAAATCGGCTTCCAGCATCTACAATGAACTGGCTGCATGAA
CATATCACAAAGAAAAAAAGAGTGCTACTCTTTGTTCCTTCTATTTCTACTATGAAGAAGGTAACTCATATTCTTCAAGT
TCAATGTGTAAATGTACAGGGAGTTTCTGCCGATGATCAAGAAAGGAAGCAAAAAGTCCAGCATTTCAGAGATCATAGAT
ACGATGTATTGGTTACAACAACTATTCTAGAAAGAGGCGTTACCATTCAAGATGTTCAAGTGGGCGTATTAGGTGCGGAA
TCTCCTATTTTTACAGAAAGTGCACTTGTCCAAATTTCTGGTAGAGCAGGGAGACATCCAGATTTTTTTAATGGAGACGT
GTACTTTTTTCATTTTGGTTTAACGAGAAGTATGAAACAAGCAAAGAAACATATCGTAAAAATGAATAATACAGCTGAAA
AAGAGTTTTCTGAAAAATAG

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (320-419)

• Type III restriction enzyme, res subunit (ResIII) (116-264)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.125	97.386	0.508
comFA/cflA	Streptococcus mitis NCTC 12261	38.928	93.464	0.364
comFA/cflA	Streptococcus pneumoniae Rx1	38.747	93.9	0.364
comFA/cflA	Streptococcus pneumoniae D39	38.747	93.9	0.364
comFA/cflA	Streptococcus pneumoniae R6	38.747	93.9	0.364
comFA/cflA	Streptococcus pneumoniae TIGR4	38.515	93.9	0.362