Detailed information NTG0983821

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NSQ30_RS17900
• Genome accession: NZ_CP151990
• Coordinates: 3408308..3408994 (-)
• Length: 228 a.a.
• NCBI ID: WP_181462031.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R7-0651
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3403308..3413994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ30_RS17865 (NSQ30_17865)	fliW	3403441..3403875 (-)	435	WP_044139341.1	flagellar assembly protein FliW	-
NSQ30_RS17870 (NSQ30_17870)	-	3403904..3404482 (-)	579	WP_003213106.1	DUF6470 family protein	-
NSQ30_RS17875 (NSQ30_17875)	flgL	3404531..3405442 (-)	912	WP_044139340.1	flagellar hook-associated protein FlgL	-
NSQ30_RS17880 (NSQ30_17880)	flgK	3405452..3406972 (-)	1521	WP_044139339.1	flagellar hook-associated protein FlgK	-
NSQ30_RS17885 (NSQ30_17885)	-	3406988..3407470 (-)	483	WP_034660146.1	flagellar protein FlgN	-
NSQ30_RS17890 (NSQ30_17890)	flgM	3407489..3407752 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
NSQ30_RS17895 (NSQ30_17895)	-	3407832..3408251 (-)	420	WP_044139338.1	TIGR03826 family flagellar region protein	-
NSQ30_RS17900 (NSQ30_17900)	comFC	3408308..3408994 (-)	687	WP_181462031.1	ComF family protein	Machinery gene
NSQ30_RS17905 (NSQ30_17905)	-	3408991..3409284 (-)	294	WP_044139337.1	competence protein ComFB	-
NSQ30_RS17910 (NSQ30_17910)	comFA	3409351..3410730 (-)	1380	WP_142671660.1	DEAD/DEAH box helicase	Machinery gene
NSQ30_RS17915 (NSQ30_17915)	-	3410850..3411692 (-)	843	WP_044139336.1	DegV family protein	-
NSQ30_RS17920 (NSQ30_17920)	degU	3411910..3412599 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSQ30_RS17925 (NSQ30_17925)	degS	3412664..3413839 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26014.45 Da
• Isoelectric Point: 9.8032

>NTDB_id=983821 NSQ30_RS17900 WP_181462031.1 3408308..3408994(-) (comFC) [Bacillus sp. FSL R7-0651]
MICLICEGHFVASFTWKSLLLLNDDRLCIACKHHLEKIQRPICPACGRAQSSDQLCQDCSRWKERPDSTSLLVKNRSVYA
YNDLMKEVLSRFKFRGDTALAELFKQDVQVVFKRSFSIKEPVLIPIPLSKERLKERGFNQSVILASLIGEPILQPLVKIH
QTKQSKKKKNERLDQKGMFQIKQTDAIVQRDVILIDDIYTTGATIYDAARILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=983821 NSQ30_RS17900 WP_181462031.1 3408308..3408994(-) (comFC) [Bacillus sp. FSL R7-0651]
TTGATCTGCCTCATTTGTGAGGGGCATTTTGTCGCTTCTTTTACATGGAAATCATTACTTCTATTAAATGATGATCGTCT
ATGTATAGCATGTAAGCATCACCTAGAAAAAATTCAACGCCCGATTTGTCCAGCCTGCGGGAGAGCACAGTCGAGCGATC
AATTATGTCAAGACTGTTCCAGGTGGAAAGAACGCCCTGATTCTACTTCATTACTTGTGAAAAATAGGTCTGTCTATGCT
TACAACGATTTGATGAAAGAGGTCCTTTCCCGCTTTAAATTTCGAGGTGATACAGCTTTAGCTGAGCTTTTTAAACAAGA
TGTCCAAGTAGTATTTAAGCGCTCTTTTTCAATTAAAGAACCTGTGCTGATCCCGATTCCTTTAAGTAAAGAAAGACTAA
AGGAAAGAGGGTTTAATCAGTCCGTCATACTTGCTTCCTTGATTGGTGAGCCGATCCTTCAGCCACTTGTGAAAATACAT
CAAACCAAACAGTCCAAGAAAAAGAAAAATGAACGTTTAGATCAAAAAGGAATGTTTCAAATCAAACAGACAGATGCGAT
CGTTCAAAGGGATGTTATCTTAATTGACGACATTTATACAACAGGGGCCACCATTTATGATGCGGCGAGAATTTTAAAAG
AAGCAGGTGCCAAAAGTGTTTCCTCTTTTACGTTGATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (142-226)

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	51.304	100	0.518
comFC/cflB	Streptococcus mitis SK321	39.565	100	0.399
comFC/cflB	Streptococcus pneumoniae D39	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae R6	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae TIGR4	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae Rx1	38.865	100	0.39
comFC/cflB	Streptococcus mitis NCTC 12261	38.865	100	0.39