Detailed information NTG0983699

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NST09_RS16510
• Genome accession: NZ_CP151988
• Coordinates: 3185494..3186180 (-)
• Length: 228 a.a.
• NCBI ID: WP_216942854.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL W7-1346
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3180494..3191180

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NST09_RS16475 (NST09_16475)	fliW	3180630..3181064 (-)	435	WP_025208061.1	flagellar assembly protein FliW	-
NST09_RS16480 (NST09_16480)	-	3181093..3181671 (-)	579	WP_216942851.1	DUF6470 family protein	-
NST09_RS16485 (NST09_16485)	flgL	3181718..3182629 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
NST09_RS16490 (NST09_16490)	flgK	3182638..3184158 (-)	1521	WP_216942853.1	flagellar hook-associated protein FlgK	-
NST09_RS16495 (NST09_16495)	-	3184174..3184656 (-)	483	WP_007499977.1	flagellar protein FlgN	-
NST09_RS16500 (NST09_16500)	flgM	3184675..3184938 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
NST09_RS16505 (NST09_16505)	-	3185018..3185437 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
NST09_RS16510 (NST09_16510)	comFC	3185494..3186180 (-)	687	WP_216942854.1	ComF family protein	Machinery gene
NST09_RS16515 (NST09_16515)	-	3186177..3186470 (-)	294	WP_008348267.1	competence protein ComFB	-
NST09_RS16520 (NST09_16520)	comFA	3186535..3187662 (-)	1128	WP_234898350.1	DEAD/DEAH box helicase	Machinery gene
NST09_RS16525 (NST09_16525)	-	3188034..3188876 (-)	843	WP_144683538.1	DegV family protein	-
NST09_RS16530 (NST09_16530)	degU	3189088..3189777 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NST09_RS16535 (NST09_16535)	degS	3189842..3191017 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26228.75 Da
• Isoelectric Point: 10.2389

>NTDB_id=983699 NST09_RS16510 WP_216942854.1 3185494..3186180(-) (comFC) [Bacillus sp. FSL W7-1346]
MICPICESHFVADFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWNKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QRKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=983699 NST09_RS16510 WP_216942854.1 3185494..3186180(-) (comFC) [Bacillus sp. FSL W7-1346]
TTGATTTGTCCAATTTGTGAGAGTCATTTTGTGGCTGATTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAAGATTGTTCAAGGTGGAATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTGCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGGAAGCAGTCAAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (162-226)

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50	100	0.504
comFC/cflB	Streptococcus mitis SK321	38.865	100	0.39
comFC/cflB	Streptococcus mitis NCTC 12261	38.428	100	0.386
comFC/cflB	Streptococcus pneumoniae R6	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae TIGR4	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae Rx1	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae D39	37.555	100	0.377