NTDB

Overview

Name	comM	Type	Machinery gene
Locus tag	ABXH21_RS11065	Genome accession	NZ_AP031472
Coordinates	2463908..2465401 (+)	Length	497 a.a.
NCBI ID	WP_353551534.1	Uniprot ID	-
Organism	Moraxella osloensis strain NBRC 115781
Function	promote branch migration (predicted from homology) Homologous recombination

Genomic Context

Location: 2458908..2470401

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXH21_RS11035 (SKB0120_21660)	-	2459138..2459743 (+)	606	WP_353551528.1	hypothetical protein	-
ABXH21_RS11040 (SKB0120_21670)	-	2459740..2460123 (-)	384	WP_353551529.1	HNH endonuclease	-
ABXH21_RS11045 (SKB0120_21680)	-	2460230..2460811 (+)	582	WP_353551531.1	DUF4442 domain-containing protein	-
ABXH21_RS11050 (SKB0120_21690)	-	2460822..2461427 (-)	606	WP_353551532.1	methyltransferase	-
ABXH21_RS11055 (SKB0120_21700)	-	2461445..2462107 (-)	663	WP_144918579.1	Abi family protein	-
ABXH21_RS11060 (SKB0120_21710)	hemN	2462221..2463699 (-)	1479	WP_353551533.1	oxygen-independent coproporphyrinogen III oxidase	-
ABXH21_RS11065 (SKB0120_21720)	comM	2463908..2465401 (+)	1494	WP_353551534.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
ABXH21_RS11070 (SKB0120_21730)	-	2465431..2465991 (-)	561	WP_353551535.1	DUF4385 domain-containing protein	-
ABXH21_RS11075 (SKB0120_21740)	-	2465978..2466712 (-)	735	WP_353551536.1	phosphoglycolate phosphatase	-
ABXH21_RS11080 (SKB0120_21750)	phoU	2466853..2467623 (-)	771	WP_353551537.1	phosphate signaling complex protein PhoU	-
ABXH21_RS11085 (SKB0120_21760)	pstS	2467970..2468974 (+)	1005	WP_353551539.1	phosphate ABC transporter substrate-binding protein PstS	-
ABXH21_RS11090 (SKB0120_21770)	-	2469057..2470397 (-)	1341	WP_060995894.1	TolC family protein	-

Sequence

Protein

Download Length: 497 a.a. Molecular weight: 53857.28 Da Isoelectric Point: 7.7435

                                >NTDB_id=98040 ABXH21_RS11065 WP_353551534.1 2463908..2465401(+) (comM) [Moraxella osloensis strain NBRC 115781]

MSFAQVYTRSVVGLNAPSVMVEVHLSQGLPAVTMVGLPEAAVRESKDRVRSAIINSGFQFPNRRLTINLAPADLPKDGAR

LDLPIAIGILAASGQIDETVLAQYEFIGELALNGDLRAIAGALAVSRALKAEQRTLIVPKDNADEAVKVDGVKVLQADTL

KAVCQHLMNEQQLSQAEHKASYQSANYQLDLADVKGQHQARRALEIAAAGGHSLLFCGSPGTGKTLMASRLPTILPPLND

HEALEVASIYSIANSDYDYGTRPFRQVHHTTSAVALVGGGSSPKPGEITLANRGVLFLDEIPEFDRKVLEVLRQPIENKE

IVISRANSQVRFPANFQLVAAMNPCPCGYYGDKSGRCQCRPEQIKRYQEKLSGPLLDRIDLHITVPALPASDLQSAQRGE

SSAAVRERVIQAYQRQQARQGKANNELSPSELDQFAPLGDAESRILAMAQSRLNLSARGYHRVLRVARTIADLAGSEAIQ

TAHLTEALSYRSQLTNA

Nucleotide

Download Length: 1494 bp

                                >NTDB_id=98040 ABXH21_RS11065 WP_353551534.1 2463908..2465401(+) (comM) [Moraxella osloensis strain NBRC 115781]

ATGTCGTTTGCTCAAGTATATACGCGCTCGGTGGTAGGTTTAAACGCGCCAAGCGTGATGGTTGAAGTACATTTATCGCA

AGGATTGCCTGCAGTCACCATGGTCGGCTTACCTGAAGCAGCGGTACGCGAGAGTAAAGACCGTGTGCGCTCTGCCATTA

TCAACTCGGGTTTTCAATTTCCCAATCGCAGATTAACTATCAACCTTGCGCCCGCGGATTTACCCAAAGATGGCGCACGG

CTTGATTTGCCCATTGCCATAGGTATCTTGGCAGCGAGTGGTCAAATTGATGAAACCGTGCTTGCGCAGTACGAGTTTAT

TGGCGAATTGGCGCTCAATGGCGATTTACGAGCCATTGCTGGGGCGTTGGCAGTATCACGCGCGCTCAAGGCGGAGCAGC

GCACCTTGATTGTTCCCAAAGACAATGCCGATGAAGCGGTGAAAGTCGATGGCGTGAAGGTGTTGCAAGCCGATACCCTC

AAAGCTGTGTGCCAACACTTGATGAACGAGCAACAACTCAGCCAAGCCGAGCATAAGGCATCTTACCAATCAGCCAATTA

TCAGCTAGATTTAGCCGATGTCAAAGGACAACACCAAGCTAGACGTGCGCTAGAGATTGCGGCAGCAGGCGGGCATTCGC

TACTATTTTGTGGCTCACCTGGGACAGGCAAAACCTTGATGGCATCTCGCCTACCCACCATTTTGCCACCGCTCAACGAC

CATGAAGCGCTCGAAGTTGCTAGTATTTACTCGATTGCCAACAGTGATTATGACTATGGCACACGCCCTTTTCGCCAAGT

CCATCATACTACCTCAGCGGTGGCGCTCGTGGGCGGCGGCTCGTCGCCCAAACCCGGTGAAATCACGCTCGCCAATCGGG

GGGTGTTATTTTTGGATGAGATTCCAGAGTTTGATCGCAAGGTGCTTGAGGTACTCAGACAGCCCATCGAGAACAAAGAA

ATTGTCATCAGCCGTGCCAACTCTCAAGTACGCTTTCCCGCCAATTTTCAGCTGGTAGCAGCGATGAATCCCTGCCCCTG

TGGCTACTATGGGGATAAATCAGGTCGCTGCCAGTGCCGACCCGAGCAAATCAAACGCTACCAAGAAAAGCTATCAGGAC

CTTTGCTGGACCGTATTGATTTGCATATTACCGTGCCTGCCCTGCCTGCCAGTGATTTGCAGTCAGCACAGAGGGGTGAG

TCTTCTGCGGCAGTGCGTGAGCGGGTGATACAAGCCTATCAGCGTCAGCAAGCCAGACAGGGCAAAGCCAATAATGAACT

CTCCCCCAGTGAACTTGACCAATTTGCGCCGCTTGGCGATGCAGAAAGTCGTATTTTGGCAATGGCACAAAGTCGGTTGA

ATCTGTCCGCGCGCGGCTATCATCGCGTCCTTCGCGTCGCCCGCACGATTGCGGACTTGGCAGGTAGTGAAGCAATCCAA

ACCGCGCATTTAACTGAGGCATTAAGTTATCGTAGTCAATTAACGAATGCTTAA

Domains

Predicted by InterProScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(190-391)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(399-491)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comM	Acinetobacter baylyi ADP1	64.3	99.195	0.638
comM	Vibrio cholerae O1 biovar El Tor strain E7946	53.226	99.799	0.531
comM	Vibrio cholerae strain A1552	53.226	99.799	0.531
comM	Vibrio campbellii strain DS40M4	53.024	99.799	0.529
comM	Glaesserella parasuis strain SC1401	52.4	100	0.527
comM	Haemophilus influenzae Rd KW20	51.594	100	0.521
comM	Legionella pneumophila str. Paris	51.303	100	0.515
comM	Legionella pneumophila strain ERS1305867	51.303	100	0.515
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.334	100	0.449

Detailed information NTG0098040