Detailed information NTG0974786

Bioinformatically predicted

Overview

• Name: rcrQ
• Type: Regulator
• Locus tag: AACH28_RS05905
• Genome accession: NZ_CP151087
• Coordinates: 1280081..1280821 (+)
• Length: 246 a.a.
• NCBI ID: WP_333621557.1
• Uniprot ID: -
• Organism: Sphingobacterium thalpophilum strain ATCC BAA-1094
• Function: regulate competence (predicted from homology) Competence regulation

Genomic Context

Location: 1275081..1285821

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACH28_RS05890 (AACH28_05890)	-	1276429..1277250 (+)	822	WP_341832507.1	ATP-binding protein	-
AACH28_RS05895 (AACH28_05895)	-	1277275..1279017 (+)	1743	WP_341832508.1	ABC transporter ATP-binding protein	-
AACH28_RS05900 (AACH28_05900)	-	1279152..1279909 (+)	758	Protein_1171	ABC transporter ATP-binding protein	-
AACH28_RS05905 (AACH28_05905)	rcrQ	1280081..1280821 (+)	741	WP_333621557.1	ATP-binding cassette domain-containing protein	Regulator
AACH28_RS05910 (AACH28_05910)	-	1281018..1281914 (+)	897	WP_341832509.1	SDR family oxidoreductase	-
AACH28_RS05915 (AACH28_05915)	-	1281924..1282847 (+)	924	WP_341832510.1	helix-turn-helix transcriptional regulator	-
AACH28_RS05920 (AACH28_05920)	-	1282993..1283346 (-)	354	WP_286769662.1	YtxH domain-containing protein	-
AACH28_RS05925 (AACH28_05925)	-	1283548..1284060 (-)	513	WP_341832511.1	hypothetical protein	-
AACH28_RS05930 (AACH28_05930)	-	1284319..1285185 (-)	867	WP_341832512.1	AraC family transcriptional regulator	-
AACH28_RS05935 (AACH28_05935)	-	1285318..1285497 (-)	180	WP_341832513.1	hypothetical protein	-

Sequence

Protein

• Length: 246 a.a.
• Molecular weight: 27405.54 Da
• Isoelectric Point: 6.8766

>NTDB_id=974786 AACH28_RS05905 WP_333621557.1 1280081..1280821(+) (rcrQ) [Sphingobacterium thalpophilum strain ATCC BAA-1094]
MPAPVQGQVTLSHVNFGYVPEKQVLFDIDIDVKPGQKIAFVGETGAGKSTIINLLPRFYPLLSGDILLDKTSIFKLDRNE
LRKKLSIVFQDTHLFTDTVMENIRYGRLSATDDEVIAAAKLAAADSFIMQLPQGYKTELTNDGANLSQGQRQLINIARAT
IANTPILILDEATSSIDTRTEIAIQEGIDRLMQNKTSFVIAHRLSTIKNADVICLIEKGRIAEFGSHTELLKQKGKYYRL
YMGQFD

Nucleotide

• Length: 741 bp

>NTDB_id=974786 AACH28_RS05905 WP_333621557.1 1280081..1280821(+) (rcrQ) [Sphingobacterium thalpophilum strain ATCC BAA-1094]
ATGCCGGCACCGGTGCAGGGCCAAGTGACACTATCGCATGTAAATTTTGGTTATGTACCGGAAAAACAGGTTTTATTTGA
TATCGACATCGACGTAAAACCAGGTCAAAAGATCGCTTTTGTGGGTGAAACTGGTGCTGGCAAGTCGACAATTATCAATT
TGCTGCCTCGCTTCTACCCTTTGCTATCCGGGGATATTCTGTTAGATAAGACATCGATTTTTAAGCTGGACCGCAATGAA
CTGCGTAAAAAACTATCTATTGTATTTCAGGACACCCATTTGTTTACCGATACGGTTATGGAAAACATCCGGTATGGCCG
GCTCAGCGCAACAGATGATGAAGTGATAGCGGCAGCGAAGCTTGCCGCAGCGGATAGCTTTATCATGCAATTGCCACAAG
GGTATAAAACCGAATTGACCAATGATGGAGCCAATCTGAGTCAGGGACAACGGCAGTTAATTAACATCGCCCGGGCAACT
ATTGCCAATACGCCAATCTTAATATTGGATGAAGCGACCAGCTCGATCGATACACGAACTGAAATCGCTATTCAGGAAGG
TATTGACCGGTTAATGCAAAACAAAACAAGCTTCGTCATTGCCCATAGACTCTCGACCATCAAGAATGCCGACGTCATCT
GTCTGATCGAAAAAGGGAGAATCGCCGAGTTCGGTTCACATACAGAATTGCTAAAGCAAAAAGGTAAATACTATCGTTTG
TATATGGGACAGTTTGACTGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-174)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rcrQ	Streptococcus mutans UA159	51.452	97.967	0.504
comA	Streptococcus gordonii str. Challis substr. CH1	39.241	96.341	0.378
comA	Streptococcus mitis SK321	38.235	96.748	0.37
comA/nlmT	Streptococcus mutans UA159	37.815	96.748	0.366
comA	Streptococcus pneumoniae R6	37.553	96.341	0.362
comA	Streptococcus pneumoniae TIGR4	37.553	96.341	0.362
comA	Streptococcus pneumoniae Rx1	37.553	96.341	0.362
comA	Streptococcus pneumoniae D39	37.553	96.341	0.362
comA	Streptococcus mitis NCTC 12261	37.395	96.748	0.362