Detailed information NTG0972987

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: AAAF57_RS08775
• Genome accession: NZ_CP150847
• Coordinates: 1906190..1907089 (-)
• Length: 299 a.a.
• NCBI ID: WP_073685698.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS5
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1901190..1912089

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAAF57_RS08755 (AAAF57_08795)	-	1902034..1902717 (+)	684	WP_260313887.1	urease cluster protein	-
AAAF57_RS08760 (AAAF57_08800)	-	1902784..1903425 (+)	642	WP_230310562.1	DUF4153 domain-containing protein	-
AAAF57_RS08765 (AAAF57_08805)	-	1903476..1903808 (-)	333	WP_002886546.1	DUF805 domain-containing protein	-
AAAF57_RS08770 (AAAF57_08810)	comA	1903919..1906015 (-)	2097	WP_175057392.1	peptide cleavage/export ABC transporter	Regulator
AAAF57_RS08775 (AAAF57_08815)	comR	1906190..1907089 (-)	900	WP_073685698.1	helix-turn-helix transcriptional regulator	Regulator
AAAF57_RS08780 (AAAF57_08820)	-	1907268..1907918 (-)	651	WP_022496033.1	phosphatase PAP2 family protein	-
AAAF57_RS08785 (AAAF57_08825)	-	1907921..1908478 (-)	558	WP_022496034.1	ECF transporter S component	-
AAAF57_RS08790 (AAAF57_08830)	-	1908768..1909277 (-)	510	WP_002883735.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
AAAF57_RS08795 (AAAF57_08835)	trkA	1909569..1910918 (+)	1350	WP_022496357.1	Trk system potassium transporter TrkA	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35170.62 Da
• Isoelectric Point: 5.3700

>NTDB_id=972987 AAAF57_RS08775 WP_073685698.1 1906190..1907089(-) (comR) [Streptococcus salivarius strain KSS5]
MNIKDSIGLRIKTERDRQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDKLSYIAKRLGKNMTDLLDHDNITIPDEYYE
MKNRLIKFPTYRNPERIKAKLALIEEVYEKFFELLPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKKKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIVKRVLNQEIWTDDVYNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIEKS
QFYSYKPNVFVLKAKYELLHKGNKKEAAENYDKAIMFASVLEDSVLEESIKAGKAADGL

Nucleotide

• Length: 900 bp

>NTDB_id=972987 AAAF57_RS08775 WP_073685698.1 1906190..1907089(-) (comR) [Streptococcus salivarius strain KSS5]
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGATCGCCAGCAGATGTCACGTGAAGTGTTATGTTT
AGATGGTGCGGAATTGACTGTTCGTCAGTTAATTCGCATTGAAAAAGGGGAGTCGCTCCCGTCTTTGGATAAATTATCTT
ATATTGCAAAACGTCTAGGAAAAAATATGACCGATTTATTGGATCATGATAATATTACTATCCCTGACGAATACTACGAG
ATGAAGAATCGTCTGATTAAGTTTCCAACGTATAGAAATCCAGAAAGAATAAAGGCTAAACTTGCCTTAATTGAGGAGGT
CTATGAGAAATTCTTTGAACTTCTCCCAGAAGAAGAATTGTTAACTCTAGATATTTTGGAAAATATTTTGAGTTTTACTA
GTTGGGAAGAGAGTCCTAAAGTTGAGGAAATATATGAAGACTTGTTTGAACAAGTCAAAAGGAAGAAGAAATTCTCAACT
AACGATTTATTAGTTATTGACTATTATTTCTTCCATCTTTATGGAAGAAAGCAGTATGATAAAAAACTTTTTGAAAGAAT
CGTAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTCTATAATATTGTTTTATTTAACGATTTGATGGCTATCG
CTGCTTTGAAGATTTTTCACAATTCCTTCTCAGACTTCTTAACAGTTGTGGATAAAGCCTTAGCTGTTATAGAAAAATCA
CAATTCTATAGCTATAAACCTAATGTTTTTGTTCTCAAAGCCAAATATGAACTTCTGCATAAAGGAAACAAGAAAGAGGC
TGCAGAAAATTACGATAAGGCCATAATGTTTGCTTCCGTTTTAGAAGACTCGGTGCTAGAAGAAAGTATAAAGGCAGGTA
AAGCGGCAGATGGTTTATAG

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (75-292)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus salivarius strain HSISS4	98.662	100	0.987
comR	Streptococcus salivarius SK126	97.993	100	0.98
comR	Streptococcus thermophilus LMG 18311	94.649	100	0.946
comR	Streptococcus thermophilus LMD-9	93.98	100	0.94
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	42.475	100	0.425
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	42.14	100	0.421