Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACL6EQ_RS04495 Genome accession   NZ_CP178716
Coordinates   881433..882176 (+) Length   247 a.a.
NCBI ID   WP_017695370.1    Uniprot ID   -
Organism   Bacillus subtilis strain SY1483     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 876433..887176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL6EQ_RS04460 (ACL6EQ_04460) yhaI 876762..877103 (+) 342 WP_009966921.1 YhaI family protein -
  ACL6EQ_RS04465 (ACL6EQ_04465) scoC 877100..877711 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  ACL6EQ_RS04470 (ACL6EQ_04470) yhaH 877889..878245 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  ACL6EQ_RS04475 (ACL6EQ_04475) - 878375..878566 (+) 192 WP_024571664.1 hypothetical protein -
  ACL6EQ_RS04480 (ACL6EQ_04480) trpP 878640..879158 (-) 519 WP_413360275.1 tryptophan transporter TrpP -
  ACL6EQ_RS04485 (ACL6EQ_04485) serC 879283..880362 (-) 1080 WP_350415881.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  ACL6EQ_RS04490 (ACL6EQ_04490) hinT 880509..880946 (-) 438 WP_003233231.1 HIT family protein -
  ACL6EQ_RS04495 (ACL6EQ_04495) pptA 881433..882176 (+) 744 WP_017695370.1 ABC transporter ATP-binding protein EcsA Regulator
  ACL6EQ_RS04500 (ACL6EQ_04500) ecsB 882169..883395 (+) 1227 WP_413360280.1 ABC transporter permease EcsB -
  ACL6EQ_RS04505 (ACL6EQ_04505) ecsC 883415..884125 (+) 711 WP_046160232.1 EcsC family protein -
  ACL6EQ_RS04510 (ACL6EQ_04510) sndC 884141..885331 (-) 1191 WP_413360284.1 N-acetyl amino acid acetylase SndC -
  ACL6EQ_RS04515 (ACL6EQ_04515) - 885403..886794 (-) 1392 WP_080286179.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27695.18 Da        Isoelectric Point: 5.9114

>NTDB_id=972801 ACL6EQ_RS04495 WP_017695370.1 881433..882176(+) (pptA) [Bacillus subtilis strain SY1483]
MSLLSVKDLTGGYTRNPVLKSVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=972801 ACL6EQ_RS04495 WP_017695370.1 881433..882176(+) (pptA) [Bacillus subtilis strain SY1483]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAGCGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547

Multiple sequence alignment