Detailed information NTG0097068

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: R8495_RS00875
• Genome accession: NZ_AP026802
• Coordinates: 139150..141324 (-)
• Length: 724 a.a.
• NCBI ID: WP_317635684.1
• Uniprot ID: -
• Organism: Xylocopilactobacillus apicola strain XA3
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 134150..146324

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8495_RS00855 (XA3_01740)	-	134775..136085 (-)	1311	WP_317635680.1	6-phospho-alpha-glucosidase	-
R8495_RS00860 (XA3_01750)	-	136261..137007 (+)	747	WP_317635681.1	MurR/RpiR family transcriptional regulator	-
R8495_RS00865 (XA3_01760)	-	137141..137317 (+)	177	WP_317635682.1	transposase	-
R8495_RS00870 (XA3_01780)	-	137775..139157 (-)	1383	WP_317635683.1	bacteriocin secretion accessory protein	-
R8495_RS00875 (XA3_01790)	comA	139150..141324 (-)	2175	WP_317635684.1	peptide cleavage/export ABC transporter	Regulator
R8495_RS00880 (XA3_01800)	-	141339..142085 (-)	747	WP_317635685.1	DNA-binding response regulator	-
R8495_RS00885 (XA3_01810)	-	142089..143417 (-)	1329	WP_317635686.1	GHKL domain-containing protein	-
R8495_RS00890	-	143466..143588 (-)	123	WP_317635687.1	hypothetical protein	-
R8495_RS00895 (XA3_01830)	-	144283..144450 (-)	168	WP_317635688.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
R8495_RS00900 (XA3_01840)	-	144472..144663 (-)	192	WP_317635689.1	bacteriocin	-
R8495_RS00905 (XA3_01850)	-	144703..144897 (-)	195	WP_317635690.1	hypothetical protein	-
R8495_RS00910 (XA3_01860)	-	144931..145092 (-)	162	WP_317635691.1	hypothetical protein	-
R8495_RS00915 (XA3_01870)	-	145114..145305 (-)	192	WP_317635689.1	bacteriocin	-

Sequence

Protein

• Length: 724 a.a.
• Molecular weight: 80712.91 Da
• Isoelectric Point: 7.0299

>NTDB_id=97068 R8495_RS00875 WP_317635684.1 139150..141324(-) (comA) [Xylocopilactobacillus apicola strain XA3]
MNPKNIYVPQVDEEDCGVASLAMILKNYGSDFSLAKLRTYTKTTNEGTTALGLKKAAEHFDLEVTAIQADMSIFSMDDIP
YPFVAHVVKEGGLLHYYVILAAKKDYILVADPDPSVKVTKMSYDVFKKEWTGVSLFFSPKSTYKPVKDNKSNSLFQFMPS
ILRQKKLLINIIIASLLGTIISILGSYFLQSIIDTYIPNNTTRTLSVIAVGLLVAYIFQAIFSYAQNFLLAILGQRLSID
IILGFVKHVFKLPMSFFSTRKTGDIISRFNDANKIIDALASSIISIGLDLSVVVIMGIVLAVQNSTLFLITLVALPLYTI
IIWAFNKPFEKLNHEQMESGAILDSSIIEDLHGIETIKSLASEDQTYQKIDTEFVDLLKKNLKYTQTDQLQQAIKLFVQL
GLGVLILWVGASLVVKNVLTVGQLMTFNALLTYFTNPLQNIINLQPKLQTAKVANNRLNEIYLVESEAKEDRPLKEANTL
NGEISLRDVYYKYGYGGDVLKNINMDIKENDKLTIVGMSGSGKSTLVKLLVDFFEPTKGKVTINKHNISEIDKETLRKQI
VYVPQAPYVFSGTILDNLRLGNRPGVTLEDIQEACEIAQIKDDIEKMSLQYATKLDENGNILSGGQKQRITIARALLSPA
KVLILDESTSGLDAITEAHLIDKLLKLDKTVIFIAHRLSIAKKTNNIVVMKQGKVVEIGTHKELFDNQDEYYQLLNATGE
LTNG

Nucleotide

• Length: 2175 bp

>NTDB_id=97068 R8495_RS00875 WP_317635684.1 139150..141324(-) (comA) [Xylocopilactobacillus apicola strain XA3]
ATGAACCCTAAAAATATTTACGTCCCACAAGTTGATGAGGAAGATTGTGGTGTTGCTTCTCTTGCCATGATCCTTAAGAA
CTATGGATCAGATTTTTCTTTAGCAAAGCTGAGAACTTATACTAAAACTACTAACGAAGGAACTACTGCTCTAGGTCTTA
AGAAGGCGGCTGAACACTTCGACCTGGAAGTAACGGCAATCCAGGCTGACATGAGTATCTTCTCGATGGACGATATACCT
TACCCCTTTGTGGCACATGTTGTTAAAGAAGGGGGACTACTTCATTATTATGTGATTTTAGCTGCAAAAAAGGATTACAT
ATTGGTTGCTGATCCAGATCCAAGTGTTAAAGTGACTAAAATGTCATACGATGTTTTTAAAAAAGAGTGGACAGGAGTTT
CACTATTTTTTTCGCCCAAGTCCACGTATAAACCCGTTAAAGACAACAAATCTAACTCGTTATTTCAGTTCATGCCATCT
ATTCTCAGACAGAAGAAACTCTTAATTAATATTATCATCGCTTCTTTGTTGGGTACGATTATCAGTATTTTGGGTTCATA
TTTTCTACAAAGTATCATTGATACTTATATTCCGAACAACACAACTCGGACGTTATCGGTGATTGCGGTCGGTCTGCTTG
TAGCTTATATTTTTCAAGCTATTTTCTCTTACGCGCAAAATTTTCTACTGGCAATTTTGGGTCAAAGGCTATCGATTGAT
ATTATTTTGGGATTCGTGAAGCACGTATTTAAGTTACCGATGTCATTTTTTAGCACTCGTAAGACAGGGGACATCATCTC
TAGGTTCAATGATGCTAATAAAATTATTGACGCTTTGGCCAGCTCGATCATTTCCATTGGATTAGATCTAAGCGTTGTTG
TTATTATGGGAATTGTTTTGGCTGTGCAAAACTCTACTCTGTTTCTGATCACTTTGGTGGCGTTGCCGCTGTACACGATT
ATCATTTGGGCTTTCAACAAACCCTTTGAGAAGCTGAATCATGAACAAATGGAGAGTGGTGCGATTTTGGATTCTTCAAT
TATTGAAGATTTACATGGAATTGAAACGATCAAATCGCTTGCGAGTGAAGATCAAACGTATCAAAAAATTGACACCGAAT
TTGTAGACCTTCTGAAGAAAAATCTAAAATATACGCAAACTGATCAACTGCAGCAAGCAATTAAACTTTTTGTTCAGCTG
GGATTAGGAGTTTTGATCTTGTGGGTAGGAGCTTCGTTAGTGGTAAAAAACGTTCTAACAGTAGGACAACTAATGACTTT
TAATGCCCTTCTAACCTATTTCACCAATCCGCTTCAAAACATCATTAACCTTCAACCCAAGCTACAAACCGCTAAGGTTG
CTAACAATCGTTTAAATGAAATTTATCTCGTTGAATCAGAAGCTAAGGAAGATCGGCCTTTAAAAGAAGCGAATACATTG
AATGGTGAGATCTCTTTGCGAGACGTGTACTACAAGTATGGTTACGGCGGAGATGTGCTGAAGAATATCAACATGGATAT
TAAAGAAAACGACAAGTTAACAATTGTCGGAATGAGCGGCTCAGGAAAGTCGACTTTAGTAAAATTGTTGGTGGATTTTT
TCGAACCAACTAAAGGAAAAGTCACGATTAACAAGCACAATATTAGTGAGATTGATAAGGAAACCTTACGAAAGCAGATT
GTCTATGTTCCACAGGCTCCTTACGTCTTCTCAGGTACCATTTTGGATAATTTAAGATTGGGAAATCGCCCAGGAGTAAC
TTTAGAAGACATTCAAGAAGCCTGCGAAATTGCGCAAATTAAAGATGATATCGAAAAAATGTCTTTGCAATATGCAACAA
AATTGGACGAAAATGGGAATATTCTCTCTGGCGGTCAAAAACAGCGAATTACAATTGCGCGAGCGTTGCTATCACCTGCT
AAAGTTTTAATTTTAGATGAGTCAACCAGTGGCTTAGATGCAATTACTGAAGCACATCTAATCGACAAGTTATTAAAACT
AGATAAGACGGTCATCTTTATTGCTCACCGATTATCGATCGCCAAGAAAACTAATAACATTGTAGTTATGAAACAAGGAA
AAGTTGTTGAAATAGGAACTCATAAGGAACTTTTCGATAATCAAGACGAATATTATCAGCTGCTCAATGCGACAGGAGAG
TTAACTAATGGATAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (168-438)

• ABC transporter (ABC_tran) (500-650)

• Peptidase C39 family (Peptidase_C39) (7-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	57.003	98.619	0.562
comA	Streptococcus mitis SK321	56.723	98.619	0.559
comA	Streptococcus pneumoniae D39	56.303	98.619	0.555
comA	Streptococcus pneumoniae TIGR4	56.303	98.619	0.555
comA	Streptococcus pneumoniae R6	56.303	98.619	0.555
comA	Streptococcus pneumoniae Rx1	56.303	98.619	0.555
comA	Streptococcus gordonii str. Challis substr. CH1	55.462	98.619	0.547
comA/nlmT	Streptococcus mutans UA159	54.507	98.066	0.535