Detailed information NTG0970627

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACLSTA_RS24855
• Genome accession: NZ_CP178203
• Coordinates: 5036969..5038489 (-)
• Length: 506 a.a.
• NCBI ID: WP_000058985.1
• Uniprot ID: -
• Organism: Escherichia coli strain APEC17
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 5031969..5043489

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLSTA_RS24845 (ACLSTA_24845)	hdfR	5035648..5036487 (-)	840	WP_000379245.1	HTH-type transcriptional regulator HdfR	-
ACLSTA_RS24850 (ACLSTA_24850)	maoP	5036606..5036944 (+)	339	WP_000841001.1	macrodomain Ori organization protein MaoP	-
ACLSTA_RS24855 (ACLSTA_24855)	comM	5036969..5038489 (-)	1521	WP_000058985.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
ACLSTA_RS24860 (ACLSTA_24860)	ilvL	5038842..5038940 (+)	99	WP_001311244.1	ilv operon leader peptide	-
ACLSTA_RS24865 (ACLSTA_24865)	ilvX	5039027..5039077 (+)	51	WP_001387183.1	peptide IlvX	-
ACLSTA_RS24870 (ACLSTA_24870)	ilvG	5039080..5040726 (+)	1647	WP_001012580.1	acetolactate synthase 2 catalytic subunit	-
ACLSTA_RS24875 (ACLSTA_24875)	ilvM	5040723..5040986 (+)	264	WP_000983255.1	acetolactate synthase 2 small subunit	-
ACLSTA_RS24880 (ACLSTA_24880)	ilvE	5041006..5041935 (+)	930	WP_000208520.1	branched-chain-amino-acid transaminase	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 55215.31 Da
• Isoelectric Point: 7.6191

>NTDB_id=970627 ACLSTA_RS24855 WP_000058985.1 5036969..5038489(-) (comM) [Escherichia coli strain APEC17]
MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEYPAKKITINLAPADLPKEGGR
YDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVPGAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHL
QAVCAFLEGKHALERPKPTNAVSRAQQHDLSDVVGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNE
EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIES
GQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPG
ESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAQWLEETLIHLGLSIRAWQRLLKVARTIADIDQSDII
TRQHLQEAVSYRAIDRLLIHLQKLLT

Nucleotide

• Length: 1521 bp

>NTDB_id=970627 ACLSTA_RS24855 WP_000058985.1 5036969..5038489(-) (comM) [Escherichia coli strain APEC17]
ATGTCACTGTCAATTGTTCATACCCGCGCAGCCCTGGGAGTAAATGCGCCCCCAATCACTGTTGAGGTACATATCAGTAA
AGGTCTACCAGGCTTAACGATGGTGGGCTTACCAGAAACAACGGTAAAAGAAGCTCGCGATCGCGTGCGCAGCGCCATTA
TCAATAGCGGATATGAATATCCGGCGAAAAAAATCACCATCAACCTTGCTCCAGCCGATCTGCCAAAAGAAGGGGGACGA
TATGATTTGCCTATCGCTATTGCGTTACTGGCGGCCTCAGAACAGCTTACAGCCAATAAGTTAGATGAATATGAATTAGT
CGGAGAACTGGCGCTTACAGGCGCTCTGCGTGGCGTTCCCGGCGCAATCTCCAGTGCAACTGAAGCTATTAAGTCGGGCA
GAAAAATTATCGTCGCGAAAGATAACGAAGATGAAGTGGGGCTAATTAACGGTGAAGGATGCCTGATAGCCGATCATCTG
CAGGCTGTCTGCGCGTTTCTGGAGGGTAAGCACGCTCTCGAACGCCCGAAACCAACTAATGCAGTATCCCGGGCGCAACA
ACATGATCTCAGTGATGTTGTCGGTCAGGAGCAAGGAAAGCGAGGACTGGAAATTACCGCCGCTGGCGGGCACAACCTTT
TACTGATTGGACCGCCGGGAACAGGTAAAACAATGCTCGCCAGCCGTATTAATGGCCTTTTGCCAGATTTAAGCAATGAA
GAGGCACTGGAGAGCGCAGCGATATTAAGTCTGGTAAATGCTGAATCAGTACAAAAACAATGGCGGCAGCGCCCGTTCCG
CTCACCTCATCACAGTGCGTCGTTAACTGCGATGGTGGGCGGTGGTGCAATTCCAGGGCCAGGTGAAATTTCGCTGGCGC
ATAACGGCGTGCTTTTTCTTGATGAGCTACCTGAATTTGAACGGCGTACACTGGATGCCTTGCGAGAGCCGATTGAATCC
GGGCAGATCCATCTTTCACGCACACGAGCAAAAATAACCTATCCAGCCCGTTTCCAACTTGTTGCGGCGATGAATCCCAG
CCCTACCGGACATTATCAGGGAAACCATAACCGCTGCACACCAGAGCAAACGCTGCGTTATCTCAACCGGCTCTCTGGTC
CCTTTCTCGACCGCTTCGATCTCTCACTGGAGATCCCATTACCGCCACCCGGCATTTTGAGTAAAACGGTAGTGCCGGGA
GAAAGCAGCGCCACCGTTAAACAACGCGTAATGGCCGCCAGAGAGCGCCAATTTAAGCGGCAGAATAAACTGAATGCCTG
GCTGGATAGTCCGGAAATACGCCAATTCTGCAAGCTTGAGAGCGAAGATGCGCAGTGGCTGGAAGAAACGCTGATCCATC
TGGGGTTATCGATTCGTGCCTGGCAGCGGTTACTGAAAGTTGCACGAACCATTGCTGATATTGATCAGTCCGACATTATC
ACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGTGCCATTGACCGTTTGCTCATCCATCTGCAAAAACTACTGACATA
A

Domains

Predicted by InterProScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	58.708	100	0.593
comM	Glaesserella parasuis strain SC1401	58.058	100	0.591
comM	Vibrio cholerae strain A1552	59.363	99.209	0.589
comM	Vibrio cholerae O1 biovar El Tor strain E7946	59.363	99.209	0.589
comM	Vibrio campbellii strain DS40M4	58.167	99.209	0.577
comM	Acinetobacter baylyi ADP1	48.996	98.419	0.482
comM	Legionella pneumophila str. Paris	47.992	98.419	0.472
comM	Legionella pneumophila strain ERS1305867	47.992	98.419	0.472
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.269	100	0.443