Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   MKX38_RS12130 Genome accession   NZ_CP150258
Coordinates   2373994..2374290 (-) Length   98 a.a.
NCBI ID   WP_003230162.1    Uniprot ID   A0A809FGR8
Organism   Bacillus sp. FSL M8-0025     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2368994..2379290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX38_RS12085 (MKX38_12085) tasA 2369401..2370186 (-) 786 WP_014664586.1 biofilm matrix protein TasA -
  MKX38_RS12090 (MKX38_12090) - 2370250..2370822 (-) 573 WP_003246088.1 signal peptidase I -
  MKX38_RS12095 (MKX38_12095) tapA 2370806..2371567 (-) 762 WP_029726724.1 amyloid fiber anchoring/assembly protein TapA -
  MKX38_RS12100 (MKX38_12100) - 2371839..2372165 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  MKX38_RS12105 (MKX38_12105) - 2372207..2372386 (-) 180 WP_029726723.1 YqzE family protein -
  MKX38_RS12110 (MKX38_12110) comGG 2372458..2372832 (-) 375 WP_014480253.1 ComG operon protein ComGG Machinery gene
  MKX38_RS12115 (MKX38_12115) comGF 2372833..2373216 (-) 384 WP_327847410.1 ComG operon protein ComGF Machinery gene
  MKX38_RS12120 (MKX38_12120) comGE 2373242..2373589 (-) 348 WP_086344081.1 ComG operon protein 5 Machinery gene
  MKX38_RS12125 (MKX38_12125) comGD 2373573..2374004 (-) 432 WP_086344082.1 comG operon protein ComGD Machinery gene
  MKX38_RS12130 (MKX38_12130) comGC 2373994..2374290 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  MKX38_RS12135 (MKX38_12135) comGB 2374304..2375341 (-) 1038 WP_339187254.1 comG operon protein ComGB Machinery gene
  MKX38_RS12140 (MKX38_12140) comGA 2375328..2376398 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  MKX38_RS12145 (MKX38_12145) - 2376610..2376807 (-) 198 WP_014480259.1 CBS domain-containing protein -
  MKX38_RS12150 (MKX38_12150) corA 2376809..2377762 (-) 954 WP_015483432.1 magnesium transporter CorA -
  MKX38_RS12155 (MKX38_12155) - 2377905..2379233 (+) 1329 WP_041850018.1 hemolysin family protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10849.74 Da        Isoelectric Point: 6.7083

>NTDB_id=968314 MKX38_RS12130 WP_003230162.1 2373994..2374290(-) (comGC) [Bacillus sp. FSL M8-0025]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=968314 MKX38_RS12130 WP_003230162.1 2373994..2374290(-) (comGC) [Bacillus sp. FSL M8-0025]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATCTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCCTACAAAACATGGTTAAGGCACAAATGACTG
CCTTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGGAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FGR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378

Multiple sequence alignment