Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | MKX38_RS12135 | Genome accession | NZ_CP150258 |
| Coordinates | 2374304..2375341 (-) | Length | 345 a.a. |
| NCBI ID | WP_339187254.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL M8-0025 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2369304..2380341
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKX38_RS12085 (MKX38_12085) | tasA | 2369401..2370186 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| MKX38_RS12090 (MKX38_12090) | - | 2370250..2370822 (-) | 573 | WP_003246088.1 | signal peptidase I | - |
| MKX38_RS12095 (MKX38_12095) | tapA | 2370806..2371567 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKX38_RS12100 (MKX38_12100) | - | 2371839..2372165 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| MKX38_RS12105 (MKX38_12105) | - | 2372207..2372386 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| MKX38_RS12110 (MKX38_12110) | comGG | 2372458..2372832 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| MKX38_RS12115 (MKX38_12115) | comGF | 2372833..2373216 (-) | 384 | WP_327847410.1 | ComG operon protein ComGF | Machinery gene |
| MKX38_RS12120 (MKX38_12120) | comGE | 2373242..2373589 (-) | 348 | WP_086344081.1 | ComG operon protein 5 | Machinery gene |
| MKX38_RS12125 (MKX38_12125) | comGD | 2373573..2374004 (-) | 432 | WP_086344082.1 | comG operon protein ComGD | Machinery gene |
| MKX38_RS12130 (MKX38_12130) | comGC | 2373994..2374290 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| MKX38_RS12135 (MKX38_12135) | comGB | 2374304..2375341 (-) | 1038 | WP_339187254.1 | comG operon protein ComGB | Machinery gene |
| MKX38_RS12140 (MKX38_12140) | comGA | 2375328..2376398 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| MKX38_RS12145 (MKX38_12145) | - | 2376610..2376807 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| MKX38_RS12150 (MKX38_12150) | corA | 2376809..2377762 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| MKX38_RS12155 (MKX38_12155) | - | 2377905..2379233 (+) | 1329 | WP_041850018.1 | hemolysin family protein | - |
| MKX38_RS12160 (MKX38_12160) | rsbRD | 2379286..2380122 (-) | 837 | WP_041850019.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39836.28 Da Isoelectric Point: 9.6859
>NTDB_id=968315 MKX38_RS12135 WP_339187254.1 2374304..2375341(-) (comGB) [Bacillus sp. FSL M8-0025]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTFLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQVDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKYQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTFLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQVDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKYQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=968315 MKX38_RS12135 WP_339187254.1 2374304..2375341(-) (comGB) [Bacillus sp. FSL M8-0025]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTTTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGTAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATATTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTGGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGTTACT
TTTTTTCTTTGCAGCTGAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAATATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCGATGATCTTACTTGTGTATTTATCTATGCTTGTACCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTTTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGTAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATATTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTGGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGTTACT
TTTTTTCTTTGCAGCTGAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAATATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCGATGATCTTACTTGTGTATTTATCTATGCTTGTACCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
97.523 |
93.623 |
0.913 |