Detailed information NTG0968310

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACK2VW_RS26385
• Genome accession: NZ_CP176678
• Coordinates: 5224255..5225280 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O121 strain GTVSS-020
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5219255..5230280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2VW_RS26365 (ACK2VW_26365)	metJ	5220316..5220633 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACK2VW_RS26370 (ACK2VW_26370)	yiiX	5220817..5221425 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
ACK2VW_RS26375 (ACK2VW_26375)	rpmE	5221486..5221698 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACK2VW_RS26380 (ACK2VW_26380)	priA	5221901..5224099 (+)	2199	WP_001370237.1	primosomal protein N'	Machinery gene
ACK2VW_RS26385 (ACK2VW_26385)	cytR	5224255..5225280 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACK2VW_RS26390 (ACK2VW_26390)	ftsN	5225372..5226331 (+)	960	WP_000068831.1	cell division protein FtsN	-
ACK2VW_RS26395 (ACK2VW_26395)	hslV	5226424..5226954 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACK2VW_RS26400 (ACK2VW_26400)	hslU	5226964..5228295 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACK2VW_RS26405 (ACK2VW_26405)	menA	5228362..5229288 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACK2VW_RS26410 (ACK2VW_26410)	rraA	5229381..5229866 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACK2VW_RS26415 (ACK2VW_26415)	zapB	5229951..5230196 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=968310 ACK2VW_RS26385 WP_000644904.1 5224255..5225280(+) (cytR) [Escherichia coli O121 strain GTVSS-020]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=968310 ACK2VW_RS26385 WP_000644904.1 5224255..5225280(+) (cytR) [Escherichia coli O121 strain GTVSS-020]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GAATTATGGTTGATCCACAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCACCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628