Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MKX38_RS12080 | Genome accession | NZ_CP150258 |
| Coordinates | 2368973..2369308 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus sp. FSL M8-0025 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2363973..2374308
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKX38_RS12060 (MKX38_12060) | gcvT | 2364565..2365653 (-) | 1089 | WP_015251720.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKX38_RS12065 (MKX38_12065) | - | 2366095..2367768 (+) | 1674 | WP_004398544.1 | SNF2-related protein | - |
| MKX38_RS12070 (MKX38_12070) | - | 2367789..2368583 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| MKX38_RS12075 (MKX38_12075) | sinI | 2368766..2368939 (+) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| MKX38_RS12080 (MKX38_12080) | sinR | 2368973..2369308 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| MKX38_RS12085 (MKX38_12085) | tasA | 2369401..2370186 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| MKX38_RS12090 (MKX38_12090) | - | 2370250..2370822 (-) | 573 | WP_003246088.1 | signal peptidase I | - |
| MKX38_RS12095 (MKX38_12095) | tapA | 2370806..2371567 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKX38_RS12100 (MKX38_12100) | - | 2371839..2372165 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| MKX38_RS12105 (MKX38_12105) | - | 2372207..2372386 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| MKX38_RS12110 (MKX38_12110) | comGG | 2372458..2372832 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| MKX38_RS12115 (MKX38_12115) | comGF | 2372833..2373216 (-) | 384 | WP_327847410.1 | ComG operon protein ComGF | Machinery gene |
| MKX38_RS12120 (MKX38_12120) | comGE | 2373242..2373589 (-) | 348 | WP_086344081.1 | ComG operon protein 5 | Machinery gene |
| MKX38_RS12125 (MKX38_12125) | comGD | 2373573..2374004 (-) | 432 | WP_086344082.1 | comG operon protein ComGD | Machinery gene |
| MKX38_RS12130 (MKX38_12130) | comGC | 2373994..2374290 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=968309 MKX38_RS12080 WP_003226345.1 2368973..2369308(+) (sinR) [Bacillus sp. FSL M8-0025]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=968309 MKX38_RS12080 WP_003226345.1 2368973..2369308(+) (sinR) [Bacillus sp. FSL M8-0025]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |