Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   NSQ79_RS01430 Genome accession   NZ_CP150200
Coordinates   265560..267656 (+) Length   698 a.a.
NCBI ID   WP_164332310.1    Uniprot ID   A0AAW7PK86
Organism   Streptococcus sp. FSL W7-1342     
Function   processing and transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 260560..272656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ79_RS01400 (NSQ79_01400) - 260803..261312 (+) 510 WP_049529100.1 tRNA (cytidine(34)-2'-O)-methyltransferase -
  NSQ79_RS01405 (NSQ79_01405) - 261621..262178 (+) 558 WP_049529098.1 ECF transporter S component -
  NSQ79_RS01410 (NSQ79_01410) - 262181..262831 (+) 651 WP_045001950.1 phosphatase PAP2 family protein -
  NSQ79_RS01415 (NSQ79_01415) - 262945..263331 (-) 387 WP_002886743.1 IS110 family transposase -
  NSQ79_RS01420 (NSQ79_01420) - 263351..264112 (-) 762 WP_002886742.1 IS110 family transposase -
  NSQ79_RS01425 (NSQ79_01425) comR 264486..265385 (+) 900 WP_049529071.1 helix-turn-helix transcriptional regulator Regulator
  NSQ79_RS01430 (NSQ79_01430) comA 265560..267656 (+) 2097 WP_164332310.1 peptide cleavage/export ABC transporter Regulator
  NSQ79_RS01435 (NSQ79_01435) - 267767..268099 (+) 333 WP_014633880.1 DUF805 domain-containing protein -
  NSQ79_RS01440 (NSQ79_01440) - 268151..269542 (-) 1392 WP_014633611.1 DUF4153 domain-containing protein -
  NSQ79_RS01445 (NSQ79_01445) - 269949..270464 (+) 516 WP_002886548.1 AmiS/UreI family transporter -
  NSQ79_RS01450 (NSQ79_01450) - 270489..270791 (+) 303 WP_002886558.1 urease subunit gamma -
  NSQ79_RS01455 (NSQ79_01455) - 270803..271114 (+) 312 WP_002886559.1 urease subunit beta -

Sequence

Protein


Download         Length: 698 a.a.        Molecular weight: 78465.46 Da        Isoelectric Point: 9.0880

>NTDB_id=966078 NSQ79_RS01430 WP_164332310.1 265560..267656(+) (comA) [Streptococcus sp. FSL W7-1342]
MSKYPYISQIDQRDCGVAALAMILKHYGSSYSLAYLRELAQTSREGTSALGLVEVAKQLGLETQAIRADLDLFKQESLSY
PFIAHVVKEGGLQHYYTVFGQIKGKLVIGDPDPSKKVIKMPLEEFAKEWTGVALFFVPGETYTKYKEDVPGLLSFLPILF
RRKGLIAVIVLLSFLVTLVNIIGSYYLQSIIDRLIPQEAYTLLTMISLGLCISYLAQQVFTFFKDYLLHRLGNYLSIAVI
LPYIKHVLSLPISFFSSRRTGEITSRFGDANTIIDALASTILSIFLDVTIVMTLAVALILQNQSLFVMTLTVVPLYVLII
LAFYKLFEKENYQLMEANSQVNTAVIDDLRGIETLKSLRVEERRYQEIEVKFHDYLKKSLSKAKWQLTQDGLKTGVQLVS
NVFILWYGAQLVMEGQLSAGQLITYNMLLNYFTTPLINIINLQSKIQQAKVANNRLQEVYVVDKEEKGKLKELSFKQLAL
KGVSHRFSYQQETLSKIDLTIHKGEKIALMGKSGSGKTTLAKMLSGYYTKSSGHVTLDKDAISHAELRQMVTYVPQQTYV
FTGTILENLLLGFEGEVDEKKLLKVCQQADILEDIQKMPLGFQTQVSEDGGLSGGQKQRLAIARALLSQQPILIFDEATS
GLDSDTESRVMANLAKIKRTMIFIAHRNSVRQHVGRVVTMVSGQIESDSPNFNPFQFI

Nucleotide


Download         Length: 2097 bp        

>NTDB_id=966078 NSQ79_RS01430 WP_164332310.1 265560..267656(+) (comA) [Streptococcus sp. FSL W7-1342]
ATGTCAAAATATCCATATATTTCACAGATTGATCAGCGTGATTGTGGTGTCGCTGCCTTGGCCATGATTCTTAAACACTA
TGGTTCATCTTATAGTTTAGCTTATTTGCGGGAGTTGGCTCAGACTTCTCGTGAAGGCACTTCTGCGCTTGGTTTGGTTG
AAGTGGCCAAGCAGTTGGGCCTTGAAACTCAGGCTATTCGTGCGGATTTAGACTTGTTTAAACAAGAAAGCCTATCTTAT
CCTTTTATTGCACATGTGGTTAAAGAAGGTGGATTGCAACATTATTATACGGTGTTTGGTCAAATCAAGGGGAAGCTTGT
TATTGGTGATCCAGATCCTAGCAAGAAGGTCATTAAAATGCCCTTAGAGGAGTTTGCCAAAGAGTGGACGGGAGTTGCTC
TCTTTTTTGTTCCAGGAGAAACTTACACTAAATACAAAGAAGATGTGCCTGGGCTTCTTTCATTTTTACCAATTTTGTTT
CGTCGTAAGGGTTTGATTGCAGTTATTGTCTTGTTAAGTTTTCTAGTGACCCTTGTTAATATTATTGGTTCTTATTATTT
GCAATCTATTATTGACCGCTTGATTCCTCAGGAGGCCTACACTCTTCTAACCATGATTTCGCTAGGCCTATGTATCTCTT
ATCTAGCTCAACAAGTATTTACTTTTTTCAAAGATTATCTTCTACATCGATTGGGGAATTACTTGTCCATTGCTGTCATT
CTTCCTTATATTAAGCATGTCCTTTCCTTACCTATTAGTTTCTTTAGTTCACGTCGTACTGGTGAAATAACGTCACGTTT
TGGCGATGCTAACACTATTATCGATGCTCTAGCTTCAACGATTTTATCGATTTTCCTAGATGTGACCATTGTGATGACTC
TAGCTGTGGCTCTTATTTTACAAAATCAGTCACTTTTTGTGATGACTCTCACGGTAGTGCCTCTTTATGTTTTAATCATT
TTGGCCTTCTATAAGCTTTTTGAAAAGGAAAATTATCAATTGATGGAGGCAAATAGTCAGGTCAATACCGCTGTTATTGA
TGATTTGCGAGGCATTGAAACCTTAAAATCCTTGAGAGTTGAAGAAAGACGCTATCAGGAAATTGAGGTGAAATTCCATG
ACTATTTGAAGAAGTCTTTGTCTAAGGCCAAGTGGCAATTAACACAGGATGGTTTAAAGACAGGGGTTCAGTTAGTTTCC
AATGTCTTTATCCTATGGTATGGGGCACAATTGGTCATGGAAGGACAGCTATCTGCAGGTCAGTTGATTACCTATAATAT
GTTGCTGAATTATTTTACAACTCCTTTAATTAATATTATCAATCTCCAATCTAAAATTCAGCAAGCCAAAGTAGCCAATA
ATCGTCTTCAAGAAGTTTATGTTGTGGATAAGGAAGAAAAAGGAAAACTTAAAGAGTTATCCTTTAAACAACTTGCTCTT
AAGGGTGTTAGTCACCGTTTTAGTTATCAGCAAGAGACGCTTAGTAAGATTGATTTAACGATTCATAAGGGGGAGAAAAT
CGCCCTCATGGGTAAAAGTGGATCTGGGAAAACGACCTTGGCTAAAATGTTGTCGGGTTATTACACAAAATCTAGTGGTC
ATGTAACCCTAGATAAAGATGCTATTAGCCATGCGGAGCTGCGTCAAATGGTGACTTACGTTCCCCAGCAGACCTATGTG
TTTACAGGCACTATTTTAGAAAATCTGCTATTAGGATTTGAAGGAGAAGTTGACGAGAAAAAGCTTCTTAAAGTTTGCCA
ACAAGCTGATATCTTAGAGGATATTCAAAAAATGCCACTAGGTTTTCAGACCCAAGTATCTGAAGATGGTGGTCTATCTG
GTGGTCAAAAACAACGCTTGGCGATAGCGAGAGCCCTCTTGTCCCAGCAGCCTATCTTGATTTTTGACGAAGCTACCAGT
GGTCTCGATAGTGATACTGAAAGCAGGGTCATGGCTAATCTTGCTAAGATTAAACGAACAATGATTTTTATTGCTCACCG
CAATAGTGTTCGTCAACATGTCGGTCGTGTGGTGACCATGGTGAGTGGCCAGATTGAGTCGGACAGTCCTAATTTCAATC
CATTCCAGTTTATTTAA

Domains

Predicted by InterproScan.

Peptidase C39 family (Peptidase_C39)

(3-139)

ABC transporter (ABC_tran)

(494-640)

ABC transporter transmembrane region (ABC_membrane)

(167-436)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Streptococcus mitis SK321

53.98

98.997

0.534
  comA Streptococcus gordonii str. Challis substr. CH1

53.305

99.713

0.532
  comA Streptococcus mitis NCTC 12261

53.546

98.997

0.53
  comA Streptococcus pneumoniae Rx1

53.401

98.997

0.529
  comA Streptococcus pneumoniae D39

53.401

98.997

0.529
  comA Streptococcus pneumoniae R6

53.401

98.997

0.529
  comA Streptococcus pneumoniae TIGR4

53.256

98.997

0.527
  comA/nlmT Streptococcus mutans UA159

50.435

98.854

0.499

Multiple sequence alignment