Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | NYE80_RS06620 | Genome accession | NZ_CP150192 |
| Coordinates | 1473862..1473999 (+) | Length | 45 a.a. |
| NCBI ID | WP_156130822.1 | Uniprot ID | - |
| Organism | Paenibacillus sp. FSL H7-0357 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1468862..1478999
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYE80_RS06595 (NYE80_06595) | - | 1468958..1469755 (+) | 798 | WP_038587126.1 | sulfate ABC transporter permease subunit | - |
| NYE80_RS06600 (NYE80_06600) | cysA | 1469758..1470822 (+) | 1065 | WP_038587129.1 | sulfate ABC transporter ATP-binding protein | - |
| NYE80_RS06605 (NYE80_06605) | - | 1471194..1472261 (+) | 1068 | WP_038587132.1 | sulfate ABC transporter substrate-binding protein | - |
| NYE80_RS06610 (NYE80_06610) | - | 1472376..1472822 (-) | 447 | WP_038587134.1 | HIT family protein | - |
| NYE80_RS06615 (NYE80_06615) | - | 1473006..1473785 (+) | 780 | WP_038587137.1 | MBL fold metallo-hydrolase | - |
| NYE80_RS06620 (NYE80_06620) | rcrQ | 1473862..1473999 (+) | 138 | WP_156130822.1 | hypothetical protein | Regulator |
| NYE80_RS06625 (NYE80_06625) | - | 1473968..1474111 (+) | 144 | WP_156130823.1 | hypothetical protein | - |
| NYE80_RS06630 (NYE80_06630) | - | 1474727..1475533 (-) | 807 | WP_038587139.1 | Cof-type HAD-IIB family hydrolase | - |
| NYE80_RS06635 (NYE80_06635) | - | 1475625..1476548 (-) | 924 | WP_038587142.1 | DMT family transporter | - |
| NYE80_RS06640 (NYE80_06640) | - | 1476790..1477503 (+) | 714 | WP_038587143.1 | metal-dependent hydrolase | - |
| NYE80_RS06645 (NYE80_06645) | - | 1477664..1478239 (+) | 576 | WP_038587146.1 | TetR/AcrR family transcriptional regulator | - |
Sequence
Protein
Download Length: 45 a.a. Molecular weight: 4944.66 Da Isoelectric Point: 6.4503
>NTDB_id=965689 NYE80_RS06620 WP_156130822.1 1473862..1473999(+) (rcrQ) [Paenibacillus sp. FSL H7-0357]
MNNKTTIVIAHRLSTVQNADVILVMENGKIVERGSHDELLAAEGR
MNNKTTIVIAHRLSTVQNADVILVMENGKIVERGSHDELLAAEGR
Nucleotide
Download Length: 138 bp
>NTDB_id=965689 NYE80_RS06620 WP_156130822.1 1473862..1473999(+) (rcrQ) [Paenibacillus sp. FSL H7-0357]
ATGAACAACAAAACAACAATCGTCATCGCCCACCGGCTCTCGACGGTCCAGAACGCCGATGTCATCCTGGTGATGGAGAA
CGGAAAAATTGTGGAGCGCGGCAGTCATGATGAGCTGCTTGCGGCTGAGGGGCGTTAG
ATGAACAACAAAACAACAATCGTCATCGCCCACCGGCTCTCGACGGTCCAGAACGCCGATGTCATCCTGGTGATGGAGAA
CGGAAAAATTGTGGAGCGCGGCAGTCATGATGAGCTGCTTGCGGCTGAGGGGCGTTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
61.364 |
97.778 |
0.6 |
| comA/nlmT | Streptococcus mutans UA159 |
56.818 |
97.778 |
0.556 |
| comA | Streptococcus mitis NCTC 12261 |
47.619 |
93.333 |
0.444 |
| comA | Streptococcus pneumoniae Rx1 |
47.619 |
93.333 |
0.444 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
47.619 |
93.333 |
0.444 |
| comA | Streptococcus pneumoniae TIGR4 |
47.619 |
93.333 |
0.444 |
| comA | Streptococcus mitis SK321 |
47.619 |
93.333 |
0.444 |
| comA | Streptococcus pneumoniae D39 |
47.619 |
93.333 |
0.444 |
| comA | Streptococcus pneumoniae R6 |
47.619 |
93.333 |
0.444 |
| rcrP | Streptococcus mutans UA159 |
51.351 |
82.222 |
0.422 |
| oppD | Streptococcus mutans UA159 |
43.59 |
86.667 |
0.378 |