Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/nlmT   Type   Regulator
Locus tag   NYE79_RS02255 Genome accession   NZ_CP150168
Coordinates   439584..441737 (-) Length   717 a.a.
NCBI ID   WP_095726455.1    Uniprot ID   -
Organism   Streptococcus sp. FSL W8-0197     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context


Location: 434584..446737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE79_RS02225 (NYE79_02225) - 434915..435244 (-) 330 WP_101800370.1 helicase BlpT -
  NYE79_RS02230 (NYE79_02230) - 435523..435861 (+) 339 WP_101800371.1 LytTR family DNA-binding domain-containing protein -
  NYE79_RS02235 (NYE79_02235) comE/blpR 435866..436603 (+) 738 WP_101800372.1 LytTR family DNA-binding domain-containing protein Regulator
  NYE79_RS02240 (NYE79_02240) - 436617..437957 (+) 1341 WP_095726453.1 sensor histidine kinase -
  NYE79_RS02245 (NYE79_02245) blpC 438000..438155 (-) 156 WP_000360258.1 quorum-sensing system pheromone BlpC -
  NYE79_RS02250 (NYE79_02250) - 438212..439573 (-) 1362 WP_095726454.1 bacteriocin secretion accessory protein -
  NYE79_RS02255 (NYE79_02255) comA/nlmT 439584..441737 (-) 2154 WP_095726455.1 peptide cleavage/export ABC transporter BlpA Regulator
  NYE79_RS02260 (NYE79_02260) - 442022..442249 (+) 228 WP_070800393.1 bacteriocin class II family protein -
  NYE79_RS02265 (NYE79_02265) - 442264..442584 (+) 321 WP_095726456.1 role in replication -
  NYE79_RS02270 (NYE79_02270) - 442614..443018 (+) 405 Protein_414 immunity protein -
  NYE79_RS02275 (NYE79_02275) - 443598..444620 (+) 1023 WP_095726459.1 thioredoxin domain-containing protein -
  NYE79_RS02280 (NYE79_02280) - 444867..445115 (+) 249 WP_095726460.1 Blp family class II bacteriocin -
  NYE79_RS02285 (NYE79_02285) - 445131..445340 (+) 210 WP_095726461.1 Blp family class II bacteriocin -
  NYE79_RS02290 (NYE79_02290) - 445917..446179 (+) 263 Protein_418 CPBP family intramembrane glutamic endopeptidase -

Sequence


Protein


Download         Length: 717 a.a.        Molecular weight: 80799.78 Da        Isoelectric Point: 7.6796

>NTDB_id=964598 NYE79_RS02255 WP_095726455.1 439584..441737(-) (comA/nlmT) [Streptococcus sp. FSL W8-0197]
MTSYKHTFVPQIDARDCGVAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAANEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFSEWTGVAIFLAPKPSYQPHKDKKNGLLSFLPL
IFKQKSLIAYIVLSSLLVTIINIGGSYYLQGILDEYIPNQMKSTLGIISIGLIITYILQQAMSFSRDYLLTVLSQRLSID
VILSYIRHIFELPMSFFATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVGGVLLAQNPNLFLLSLISIPIYMF
IIFSFMKPFEKMNHDVMQSNSMVSSAIIEDINGIETIKSLTSEENRYQNIDSEFVDYLEKSFKLTKYSILQTNLKQGTKL
VLNIFILWFGAQLVMSSKISIGQLITFNTLLSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENSVHSHFL
MGDIEFDDLSYKYGFGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKVLRRHI
NYLPQQAYIFNGSILENLTLGGNNMISQEDILKACELAEIRQDIERMPMGYQTQLSDGAGLSGGQKQRIALARALLTKSP
VLILDEATSALDVLTEKKVIDNLMSLTDKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELIQAQGFYHHLFNK

Nucleotide


Download         Length: 2154 bp        

>NTDB_id=964598 NYE79_RS02255 WP_095726455.1 439584..441737(-) (comA/nlmT) [Streptococcus sp. FSL W8-0197]
ATGACTTCTTATAAACATACATTTGTTCCTCAAATAGATGCTAGAGACTGTGGTGTCGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAACAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCAAATGAAATGGGATTTGAAACAAGGCCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGGAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACAAAAATGTCAAAAGAACGCTTTTTCTCTGAATGGACTGGAG
TAGCTATTTTTCTAGCTCCCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTGAGCTTCCTCCCTCTG
ATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTAGTCACTATTATCAATATCGGTGGTTCTTA
TTATCTCCAAGGAATCTTAGATGAATACATCCCAAATCAGATGAAATCAACTTTAGGAATTATCTCAATTGGTCTAATTA
TCACCTATATCCTCCAACAAGCCATGAGCTTCTCCAGAGATTATCTCCTAACTGTTCTGAGTCAGAGATTAAGTATTGAT
GTGATTTTATCCTATATTCGCCATATTTTTGAACTTCCTATGTCTTTCTTTGCGACACGTCGTACAGGAGAAATCATTTC
ACGGTTCACAGATGCTAACTCTATTATAGATGCCTTGGCTTCTACCATTCTTTCTCTTTTTCTGGATGTTTCTATTCTGA
TTCTTGTAGGGGGCGTCTTACTGGCACAAAACCCTAATCTCTTCCTTCTTTCTCTTATTTCCATTCCTATATACATGTTC
ATCATCTTTTCTTTTATGAAGCCTTTCGAAAAAATGAACCATGATGTCATGCAAAGTAATTCTATGGTTAGCTCTGCTAT
TATCGAAGATATCAACGGGATTGAAACTATAAAGTCGCTCACGAGTGAAGAAAATCGCTATCAAAATATAGACAGCGAAT
TTGTAGATTATTTGGAAAAATCCTTTAAACTTACTAAATATTCTATTTTACAAACTAATTTAAAGCAAGGAACAAAGTTA
GTTCTTAATATCTTTATCCTATGGTTTGGTGCTCAATTAGTCATGTCGAGTAAAATTTCTATCGGTCAGCTGATTACCTT
TAATACACTTCTTTCTTACTTTACAACTCCTATGGAAAATATTATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTTG
CTAATAACCGCTTGAACGAGGTCTATTTAGTCGAATCTGAATTTCAAGTTCAAGAAAACTCTGTTCATTCACATTTTTTG
ATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGTTTTGGGCGAGATACCTTAACGGATATTAATCTAACGAT
TAAACAAGGAGATAAGGTCAGCCTGGTTGGAGTTAGTGGTTCTGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCT
TTGAACCTTACAAAGGACATATTTCCATCAATCATCAGGATATTAAAAATATTGATAAAAAAGTCTTGCGCCGTCATATT
AATTACCTGCCCCAACAAGCCTATATCTTTAATGGCTCTATCTTGGAAAACTTAACCTTGGGTGGTAATAATATGATTAG
CCAAGAAGATATTCTAAAAGCTTGCGAATTAGCTGAAATCCGTCAAGATATTGAAAGAATGCCTATGGGCTATCAAACTC
AACTTTCTGATGGAGCAGGTCTGTCAGGAGGACAGAAGCAACGAATCGCCCTCGCTCGTGCTCTTTTAACTAAATCTCCT
GTTTTAATACTAGATGAAGCTACTAGTGCTCTCGATGTTTTGACTGAGAAAAAGGTTATAGATAATCTTATGTCCCTAAC
TGATAAAACCATTCTCTTTGTAGCCCATCGTCTAAGTATAGCCGAACGGACTAACCGTGTCATTGTTCTTGACCAAGGGA
AAATCATTGAAGTTGGTAGTCATCAAGAGTTAATACAGGCGCAAGGCTTCTACCATCATCTATTCAACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

72.293

99.163

0.717

  comA Streptococcus mitis NCTC 12261

66.199

99.442

0.658

  comA Streptococcus gordonii str. Challis substr. CH1

65.46

100

0.656

  comA Streptococcus pneumoniae Rx1

65.638

99.442

0.653

  comA Streptococcus pneumoniae D39

65.638

99.442

0.653

  comA Streptococcus pneumoniae R6

65.638

99.442

0.653

  comA Streptococcus mitis SK321

65.638

99.442

0.653

  comA Streptococcus pneumoniae TIGR4

65.358

99.442

0.65


Multiple sequence alignment