Detailed information NTG0095625

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: LGMS210922A_RS01985
• Genome accession: NZ_AP026069
• Coordinates: 411054..413264 (+)
• Length: 736 a.a.
• NCBI ID: WP_265150257.1
• Uniprot ID: A0AA43PHS5
• Organism: Lactococcus garvieae strain MS210922A
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 406054..418264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LGMS210922A_RS01970 (LGMS210922A_03810)	-	407429..408985 (+)	1557	WP_176490086.1	ABC-F family ATP-binding cassette domain-containing protein	-
LGMS210922A_RS01975 (LGMS210922A_03820)	-	409151..410326 (+)	1176	WP_004259189.1	SLC13 family permease	-
LGMS210922A_RS01980 (LGMS210922A_03830)	comEA/celA/cilE	410384..411034 (+)	651	WP_265150255.1	helix-hairpin-helix domain-containing protein	Machinery gene
LGMS210922A_RS01985	comEC	411054..413264 (+)	2211	WP_265150257.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LGMS210922A_RS01990 (LGMS210922A_03850)	-	413419..414195 (+)	777	WP_014024338.1	alpha/beta hydrolase	-
LGMS210922A_RS01995 (LGMS210922A_03860)	-	414391..414606 (+)	216	WP_003135074.1	F0F1 ATP synthase subunit C	-
LGMS210922A_RS02000 (LGMS210922A_03870)	atpB	414661..415374 (+)	714	WP_004259176.1	F0F1 ATP synthase subunit A	-
LGMS210922A_RS02005 (LGMS210922A_03880)	atpF	415388..415894 (+)	507	WP_004259173.1	F0F1 ATP synthase subunit B	-
LGMS210922A_RS02010 (LGMS210922A_03890)	-	415909..416436 (+)	528	WP_014024339.1	F0F1 ATP synthase subunit delta	-
LGMS210922A_RS02015 (LGMS210922A_03900)	atpA	416501..418009 (+)	1509	WP_004259170.1	F0F1 ATP synthase subunit alpha	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 85120.77 Da
• Isoelectric Point: 9.5057

>NTDB_id=95625 LGMS210922A_RS01985 WP_265150257.1 411054..413264(+) (comEC) [Lactococcus garvieae strain MS210922A]
MKQKFSLISFVYLLVFVYFLIFSFSWPLLILSLFSFFIAFYRQYYSVLVLLLCFSLFLLMIKKETEVQERKQPEKISKIT
PYMDTLQVNGSRLSFRGEVNGNDFQAFYTLTSEKEKEYFKKLAVKGTFYLEGTLEIPEEQRNFSGFDYRKYLRTQGIYRL
LKIEKIHGFEEKQDFDLRLVRRKAILWTQEHFPFPMSSYMTGLLFGWLDKDFEEMGDLYTSLGIIHLFALSGMQVNFFIE
LLRNILLRLGLSQKLVFFIQIPFSIFYAFLTGLSLSILRALLQKNIPLKNSSDRFSVTFLLLMVFSPYFLLTTGGQLTML
YSFLITFFSGKFKELKGLKKSLLDSTVLAIGVLPLLIFHFHSFQPLSIILTLLFSLIFDFLLLPGLLFVFLLSLFGTDLT
LFNPFFIVLESIVRWVGDLFDQPIVFGKPNLIFLLLLFMLSGLALDFYKKRNWNLSIIMVLFLLFFFVKNPKHPSITMVD
VGQGDSILLQDSWNSQNILIDTGGRLKIRADEQWKEGIYKSNAENTLLPYLRARGVSKIDVLIVTHPDEDHIGDLESVAQ
KVPIKNVYVSASALEKKSFAKKLSRLNSQIHIVQEGDKLPIFNSYLWFLTTGVEGKSDNDNSLVTFGEFYGKKFLFTGDL
EEEGEMQLQEEYPHLEVDVLKVGHHGSKTSSKEAFLEAINPTLALISAGKNNRYKHPNQETLQQFAARGIKIYRTDQQGA
IRLLYKKGSWHIQTVK

Nucleotide

• Length: 2211 bp

>NTDB_id=95625 LGMS210922A_RS01985 WP_265150257.1 411054..413264(+) (comEC) [Lactococcus garvieae strain MS210922A]
ATGAAACAAAAATTTTCGCTTATCTCTTTCGTTTATCTCTTAGTCTTTGTTTATTTTCTTATTTTTAGTTTTTCATGGCC
TTTACTTATTCTTAGTCTCTTTAGTTTCTTCATCGCTTTTTATCGTCAATACTATAGTGTGTTAGTTCTTTTACTGTGCT
TTAGTTTATTCTTACTCATGATAAAAAAAGAAACGGAAGTACAAGAAAGAAAGCAACCAGAAAAAATTTCGAAAATTACC
CCTTATATGGATACTCTTCAAGTAAATGGAAGCAGGCTCAGTTTCAGAGGAGAAGTGAACGGCAACGACTTCCAAGCTTT
TTACACCTTGACCTCGGAAAAAGAAAAAGAATACTTCAAAAAACTTGCGGTGAAGGGGACTTTTTACCTTGAAGGCACTT
TGGAGATTCCAGAAGAGCAAAGAAACTTTTCAGGTTTTGATTACAGGAAGTATTTAAGGACTCAAGGGATTTATCGTCTT
CTTAAAATAGAAAAAATTCATGGATTTGAAGAAAAACAGGACTTTGATTTACGGCTGGTACGCCGAAAAGCCATTCTTTG
GACTCAGGAACATTTCCCTTTTCCTATGTCGTCCTATATGACAGGGCTTCTTTTTGGGTGGTTGGATAAAGACTTTGAAG
AAATGGGGGATCTTTACACCAGTCTTGGCATTATCCATTTATTTGCGCTGTCAGGCATGCAGGTGAATTTTTTTATTGAA
CTTCTCCGAAATATTTTACTGCGGCTTGGCTTATCACAGAAGTTAGTCTTTTTTATCCAAATTCCCTTTTCGATATTTTA
TGCATTTCTTACAGGCTTATCTCTTTCAATCTTACGCGCGCTTCTTCAAAAAAATATCCCCCTTAAAAATTCAAGCGATA
GATTTTCTGTCACTTTTCTTCTTTTAATGGTGTTCAGTCCTTATTTCCTGCTGACAACAGGAGGACAACTCACGATGCTT
TATTCTTTCTTAATCACATTTTTTTCAGGAAAGTTCAAAGAACTAAAAGGATTAAAAAAATCGTTACTTGATTCTACCGT
CCTAGCTATTGGGGTTCTTCCGCTTTTGATTTTTCACTTCCATAGTTTTCAGCCATTATCGATTATCTTGACTTTATTAT
TTAGTCTGATTTTTGATTTTTTACTTCTGCCAGGTTTACTTTTTGTTTTTCTTCTTTCTTTATTCGGTACTGATCTCACG
TTATTTAATCCTTTTTTTATTGTTTTAGAATCAATAGTAAGATGGGTGGGCGATTTATTTGACCAGCCGATTGTCTTTGG
CAAACCCAACCTTATTTTTTTACTTTTACTTTTTATGCTGAGTGGACTTGCCCTTGATTTTTATAAAAAAAGGAACTGGA
ACTTGAGCATAATAATGGTCCTTTTCTTGCTTTTTTTCTTTGTTAAGAATCCTAAACACCCAAGCATTACAATGGTAGAT
GTGGGACAAGGGGACAGTATTCTTTTACAAGACAGTTGGAACAGCCAAAACATCCTCATCGATACGGGCGGGAGATTAAA
AATAAGAGCTGATGAGCAGTGGAAGGAGGGAATCTATAAGAGCAATGCCGAAAATACACTTCTGCCTTATCTGAGAGCGC
GTGGCGTGAGTAAGATAGATGTTCTGATTGTGACACATCCAGATGAGGATCATATTGGAGACCTGGAGAGTGTAGCTCAG
AAAGTACCAATAAAAAATGTTTATGTGTCAGCTTCTGCATTGGAGAAGAAAAGCTTTGCTAAAAAACTCAGCCGTTTAAA
CAGTCAGATTCACATTGTGCAGGAGGGGGACAAGCTCCCCATCTTTAACAGTTATCTCTGGTTTTTAACGACAGGCGTTG
AAGGTAAAAGCGACAATGATAATTCTTTAGTGACATTTGGTGAATTTTATGGGAAGAAATTTCTTTTTACAGGTGACTTA
GAAGAAGAGGGAGAGATGCAACTCCAGGAAGAATATCCCCATTTAGAGGTGGATGTCCTAAAAGTTGGACATCATGGCAG
TAAAACTTCTTCAAAGGAAGCTTTTTTAGAAGCAATCAACCCTACGCTCGCTCTTATTTCGGCTGGAAAGAATAATCGAT
ATAAACATCCCAATCAAGAAACGCTCCAACAATTCGCTGCACGAGGCATAAAAATTTATCGTACAGACCAGCAAGGGGCA
ATCCGTCTCCTTTATAAAAAAGGCAGTTGGCACATTCAAACAGTAAAGTAG

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (24-166)

• Metallo-beta-lactamase superfamily (Lactamase_B) (481-689)

• Competence protein (Competence) (203-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	53.206	99.592	0.53
comEC/celB	Streptococcus mitis SK321	44.993	100	0.458
comEC/celB	Streptococcus mitis NCTC 12261	43.7	100	0.443
comEC/celB	Streptococcus pneumoniae Rx1	43.373	100	0.44
comEC/celB	Streptococcus pneumoniae D39	43.373	100	0.44
comEC/celB	Streptococcus pneumoniae R6	43.373	100	0.44
comEC/celB	Streptococcus pneumoniae TIGR4	43.472	100	0.439