Detailed information NTG0948282

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ACG3JG_RS09060
• Genome accession: NZ_CP171730
• Coordinates: 1804535..1805452 (+)
• Length: 305 a.a.
• NCBI ID: WP_013793590.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain DB-WT
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1799535..1810452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JG_RS09040 (ACG3JG_09040)	purE	1800989..1801477 (+)	489	WP_003107462.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
ACG3JG_RS09045 (ACG3JG_09045)	purK	1801464..1802555 (+)	1092	WP_013793587.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
ACG3JG_RS09050 (ACG3JG_09050)	-	1802684..1802911 (+)	228	WP_013793588.1	hypothetical protein	-
ACG3JG_RS09055 (ACG3JG_09055)	purB	1803126..1804418 (+)	1293	WP_013793589.1	adenylosuccinate lyase	-
ACG3JG_RS09060 (ACG3JG_09060)	comR	1804535..1805452 (+)	918	WP_013793590.1	helix-turn-helix transcriptional regulator	Regulator
ACG3JG_RS09065 (ACG3JG_09065)	-	1805518..1805616 (+)	99	WP_202951667.1	quorum-sensing system DWW-type pheromone	-
ACG3JG_RS09070 (ACG3JG_09070)	ruvB	1805751..1806749 (+)	999	WP_013793591.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ACG3JG_RS09075 (ACG3JG_09075)	-	1806973..1807401 (+)	429	WP_003107455.1	low molecular weight protein-tyrosine-phosphatase	-
ACG3JG_RS09080 (ACG3JG_09080)	-	1807430..1807831 (+)	402	WP_003105881.1	membrane protein	-
ACG3JG_RS09085 (ACG3JG_09085)	-	1807828..1809606 (+)	1779	WP_003107454.1	acyltransferase family protein	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 35780.86 Da
• Isoelectric Point: 9.0707

>NTDB_id=948282 ACG3JG_RS09060 WP_013793590.1 1804535..1805452(+) (comR) [Streptococcus parauberis strain DB-WT]
MPELGDKIKAIRLGKKLTRESICGDETELSVRQLVRIEQNQSLPTLAKLVYLAKVLDIRLDKLINPKTISIPHDYLALKY
QIIRTPLYMNDQVMAIREGQFDAIFEKYYDYLPDEEKLIIDFLQSKFDVYQSGDANFGRPLLQDYIRQISKKKRYQINDI
FLIDLYLTCAIVSSFKAEFFDLDLYRRFLSKLLLMEKTLALSDLFLLNNVLLTCIDVGIRIGHFELIQPALKASHRIMYK
VQDFQRLPIYCMHAWKNALFYTKSVKRGEDYFHQAQLFAKLIGDKNLEGKLAREWQKNLAESEKT

Nucleotide

• Length: 918 bp

>NTDB_id=948282 ACG3JG_RS09060 WP_013793590.1 1804535..1805452(+) (comR) [Streptococcus parauberis strain DB-WT]
ATGCCAGAGCTCGGGGATAAAATCAAAGCTATTCGACTGGGAAAAAAGTTAACTAGAGAGTCTATTTGCGGTGATGAGAC
AGAATTGTCTGTGCGTCAATTGGTACGAATTGAGCAAAATCAATCTCTGCCTACTCTTGCAAAATTAGTTTATCTTGCTA
AAGTTCTAGATATTAGACTTGATAAGTTAATTAACCCAAAAACAATTTCAATCCCACATGATTATCTTGCCCTTAAATAT
CAAATTATCCGGACACCGTTGTATATGAATGATCAAGTTATGGCAATTAGAGAAGGGCAGTTTGATGCTATTTTTGAAAA
GTACTATGACTATTTGCCAGATGAAGAAAAACTCATTATTGATTTTTTACAATCTAAATTTGATGTCTATCAAAGTGGAG
ATGCAAATTTTGGCCGTCCCCTCTTACAAGATTACATCAGACAAATCAGTAAGAAAAAACGCTATCAAATTAATGATATC
TTCTTAATTGATCTCTATTTAACCTGTGCGATTGTCAGTTCTTTTAAAGCTGAGTTTTTTGACTTGGACCTTTATCGTCG
CTTTCTGTCCAAGTTATTGTTAATGGAGAAGACATTAGCCTTAAGTGATTTATTCTTACTTAATAATGTCCTTTTAACCT
GTATTGATGTTGGTATTAGGATAGGTCATTTTGAACTCATTCAACCGGCTTTAAAGGCAAGTCATCGCATTATGTACAAG
GTTCAAGATTTCCAACGCCTGCCAATTTACTGCATGCATGCCTGGAAAAATGCTCTTTTTTATACTAAGTCTGTAAAAAG
AGGAGAGGATTACTTTCATCAGGCGCAGCTATTTGCCAAATTGATTGGTGATAAAAATTTGGAAGGGAAATTAGCTCGTG
AATGGCAAAAAAATTTGGCAGAAAGTGAAAAAACATGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (72-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus pyogenes MGAS315	45.819	98.033	0.449
comR	Streptococcus mutans UA159	42.617	97.705	0.416
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	43.902	94.098	0.413
comR	Streptococcus pyogenes MGAS8232	39.799	98.033	0.39
comR	Streptococcus suis P1/7	37.374	97.377	0.364
comR	Streptococcus suis 05ZYH33	37.374	97.377	0.364